Gut microbiota changes and its potential relations with thyroid carcinoma

生物 肠道菌群 逻辑回归 队列 蛋白质细菌 动物 遗传学 内科学 16S核糖体RNA 免疫学 基因 医学
作者
Xiaqing Yu,Wen Jiang,Russell Oliver Kosik,Yingchun Song,Qiong Luo,Tingting Qiao,Junyu Tong,Simin Liu,Chengwen Deng,Shanshan Qin,Zhongwei Lv,Dan Li
出处
期刊:Journal of Advanced Research [Elsevier BV]
卷期号:35: 61-70 被引量:58
标识
DOI:10.1016/j.jare.2021.04.001
摘要

Emerging evidence suggests that the essence of life is the ecological balance of the neural, endocrine, metabolic, microbial, and immune systems. Gut microbiota have been implicated as an important factor affecting thyroid homeostasis.This study aims to explore the relationship between gut microbiota and the development of thyroid carcinoma.Stool samples were collected from 90 thyroid carcinoma patients (TCs) and 90 healthy controls (HCs). Microbiota were analyzed using 16S ribosomal RNA gene sequencing. A cross-sectional study of an exploratory cohort of 60 TCs and 60 HCs was conducted. The gut microbiota signature of TCs was established by LEfSe, stepwise logistic regression, lasso regression, and random forest model analysis. An independent cohort of 30 TCs and 30 HCs was used to validate the findings. Functional prediction was achieved using Tax4Fun and PICRUSt2. TC patients were subsequently divided into subgroups to analyze the relationship between microbiota and metastatic lymphadenopathy.In the exploratory cohorts, TCs had reduced richness and diversity of gut microbiota compared to HCs. No significant difference was found between TCs and HCs on the phylum level, though 70% of TCs had increased levels of Proteobacteria-types based on dominant microbiota typing. A prediction model of 10 genera generated with LEfSe analysis and lasso regression distinguished TCs from HCs with areas under the curves of 0.809 and 0.746 in the exploration and validation cohorts respectively. Functional prediction suggested that the microbial changes observed in TCs resulted in a decline in aminoacyl-tRNA biosynthesis, homologous recombination, mismatch repair, DNA replication, and nucleotide excision repair. A four-genus microbial signature was able to distinguish TC patients with metastatic lymphadenopathy from those without metastatic lymphadenopathy.Our study shows that thyroid carcinoma patients demonstrate significant changes in gut microbiota, which will help delineate the relationship between gut microbiota and TC pathogenesis.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
多情的白云完成签到,获得积分10
刚刚
4秒前
谭沁瑶完成签到 ,获得积分10
5秒前
云也发布了新的文献求助10
5秒前
万花谷发布了新的文献求助10
5秒前
5秒前
6秒前
8秒前
9秒前
9秒前
Candice应助盒子采纳,获得10
10秒前
健壮的君浩完成签到,获得积分10
10秒前
hgh关闭了hgh文献求助
11秒前
卡萨卡萨完成签到,获得积分10
11秒前
新嗨发布了新的文献求助30
12秒前
wbcl完成签到,获得积分10
12秒前
silence发布了新的文献求助10
12秒前
ABC的小李完成签到,获得积分20
12秒前
13秒前
手拿大炮发布了新的文献求助10
14秒前
万花谷完成签到,获得积分10
14秒前
14秒前
chen完成签到,获得积分10
14秒前
李健的小迷弟应助赵若辰采纳,获得10
14秒前
15秒前
16秒前
孟佳怡发布了新的文献求助10
17秒前
研友_nERlDZ发布了新的文献求助10
18秒前
劳永杰发布了新的文献求助10
19秒前
FashionBoy应助研友_Z6W1b8采纳,获得10
20秒前
手拿大炮完成签到,获得积分10
21秒前
沉思录完成签到,获得积分10
23秒前
23秒前
xin完成签到 ,获得积分10
23秒前
24秒前
慕青应助韩跑跑采纳,获得10
24秒前
24秒前
24秒前
25秒前
JamesPei应助123采纳,获得10
25秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Lewis’s Child and Adolescent Psychiatry: A Comprehensive Textbook Sixth Edition 2000
Cronologia da história de Macau 1600
Treatment response-adapted risk index model for survival prediction and adjuvant chemotherapy selection in nonmetastatic nasopharyngeal carcinoma 1000
Lloyd's Register of Shipping's Approach to the Control of Incidents of Brittle Fracture in Ship Structures 1000
BRITTLE FRACTURE IN WELDED SHIPS 1000
Toughness acceptance criteria for rack materials and weldments in jack-ups 800
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 纳米技术 计算机科学 化学工程 生物化学 物理 复合材料 内科学 催化作用 物理化学 光电子学 细胞生物学 基因 电极 遗传学
热门帖子
关注 科研通微信公众号,转发送积分 6207992
求助须知:如何正确求助?哪些是违规求助? 8034336
关于积分的说明 16736963
捐赠科研通 5298940
什么是DOI,文献DOI怎么找? 2823192
邀请新用户注册赠送积分活动 1802093
关于科研通互助平台的介绍 1663497