孟德尔随机化
生物
全基因组关联研究
遗传学
PCSK9
表型
基因
表观遗传学
长寿
插补(统计学)
计算生物学
生物信息学
单核苷酸多态性
基因型
遗传变异
内分泌学
机器学习
脂蛋白
胆固醇
缺少数据
低密度脂蛋白受体
计算机科学
作者
Daniel B. Rosoff,Lucas A. Mavromatis,Andrew S. Bell,Josephin Wagner,Jeesun Jung,Riccardo E. Marioni,George Davey Smith,Steve Horvath,Falk W. Lohoff
出处
期刊:Nature Aging
日期:2023-08-07
卷期号:3 (8): 1020-1035
被引量:22
标识
DOI:10.1038/s43587-023-00455-5
摘要
Abstract The concept of aging is complex, including many related phenotypes such as healthspan, lifespan, extreme longevity, frailty and epigenetic aging, suggesting shared biological underpinnings; however, aging-related endpoints have been primarily assessed individually. Using data from these traits and multivariate genome-wide association study methods, we modeled their underlying genetic factor (‘mvAge’). mvAge (effective n = ~1.9 million participants of European ancestry) identified 52 independent variants in 38 genomic loci. Twenty variants were novel (not reported in input genome-wide association studies). Transcriptomic imputation identified age-relevant genes, including VEGFA and PHB1 . Drug-target Mendelian randomization with metformin target genes showed a beneficial impact on mvAge ( P value = 8.41 × 10 −5 ). Similarly, genetically proxied thiazolidinediones ( P value = 3.50 × 10 −10 ), proprotein convertase subtilisin/kexin 9 inhibition ( P value = 1.62 × 10 −6 ), angiopoietin-like protein 4, beta blockers and calcium channel blockers also had beneficial Mendelian randomization estimates. Extending the drug-target Mendelian randomization framework to 3,947 protein-coding genes prioritized 122 targets. Together, these findings will inform future studies aimed at improving healthy aging.
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