Elucidating the Mechanisms of Astragalus Membranaceus in Colorectal Cancer Patients through Bioinformatics Analysis

小桶 黄芪 基因 生物 结直肠癌 计算生物学 小RNA 生物信息学 基因表达 遗传学 癌症 中医药 转录组 医学 病理 替代医学
作者
Shuwei Wang,Jiandong Tang,Li Gan,Songbing He
出处
期刊:Current Medicinal Chemistry [Bentham Science]
卷期号:32
标识
DOI:10.2174/0109298673344265241014114804
摘要

Background: Astragalus membranaceus has shown positive clinical efficacy in treating colorectal cancer (CRC). Objective: This study aimed to identify the key active components of Astragalus and determine effective targets of these components in CRC patients. Methods: We identified active components of Astragalus membranaceus and differentially expressed genes in traditional Chinese medicine systems pharmacology database and The Cancer Genome Atlas. Additionally, the enrichment analysis of differential target genes (DTGs) was performed using the R-package clusterProfiler. Immunocyte correlation analysis and non-coding regulatory network construction were performed for biomarkers using Spearman’s method and NetworkAnalyst. Finally, molecular docking of biomarkers and their corresponding molecule drugs was done with Autodock Vina software. Results: We identified 20 active components of Astragalus membranaceus and 1 403 target genes through screening. A total of 2 300 differentially expressed genes, and 3 035 hub genes in CRC were screened. The integration of the target genes with the significantly differentially expressed genes and Hub genes identified resulted in a total of 86 DTGs. Subsequently, the results showed 828 enriched GO biological processes, 184 enriched GO molecular functions, 59 enriched GO cellular components, and 46 enriched KEGG pathways. We also obtained a total of 143 PPI pairs involving 67 nodes. Additionally, we constructed 45 mRNA-TF pairs, 101 miRNA-mRNA pairs, and 200 miRNA- mRNA-TF triplets. Finally, molecular docking was performed for the active component quercetin with F2 and UGT1A1 and formic acid with FGA, AHSG, and KNG1. Conclusion: This study identified the active components of Astragalus membranaceus and their corresponding targets in CRC. These findings provide robust evidence for precision drug therapy in patients with CRC.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
刚刚
Cheryy完成签到,获得积分10
1秒前
Neko发布了新的文献求助10
1秒前
txh12323发布了新的文献求助10
2秒前
大方溪流发布了新的文献求助10
2秒前
3秒前
Queen发布了新的文献求助10
3秒前
Water103完成签到,获得积分20
3秒前
4秒前
科研通AI5应助辣辣叔采纳,获得10
5秒前
6秒前
7秒前
Lucas应助练习者采纳,获得10
7秒前
结实惜灵发布了新的文献求助10
8秒前
好运发布了新的文献求助10
9秒前
燕尔蓝完成签到,获得积分10
9秒前
英俊的铭应助巴啦啦采纳,获得10
10秒前
完美世界应助Queen采纳,获得10
11秒前
11秒前
11秒前
12秒前
wanci应助勤劳的身影采纳,获得10
12秒前
lalala发布了新的文献求助10
13秒前
orixero应助凉白开采纳,获得10
13秒前
queer发布了新的文献求助10
14秒前
科研通AI5应助山竹采纳,获得10
14秒前
深情安青应助muse999采纳,获得10
14秒前
宋卜宁发布了新的文献求助10
15秒前
16秒前
16秒前
小张完成签到,获得积分10
16秒前
舒适的雪珍完成签到,获得积分10
17秒前
归尘发布了新的文献求助10
18秒前
舒适的向秋完成签到,获得积分10
18秒前
郭小胖14应助尺八采纳,获得10
18秒前
Phillar发布了新的文献求助20
19秒前
yin完成签到,获得积分10
19秒前
niy6tyg完成签到,获得积分10
19秒前
bkagyin应助Mathilda采纳,获得20
20秒前
20秒前
高分求助中
Continuum Thermodynamics and Material Modelling 4000
Production Logging: Theoretical and Interpretive Elements 2700
Les Mantodea de Guyane Insecta, Polyneoptera 1000
Unseen Mendieta: The Unpublished Works of Ana Mendieta 1000
El viaje de una vida: Memorias de María Lecea 800
Theory of Block Polymer Self-Assembly 750
Luis Lacasa - Sobre esto y aquello 700
热门求助领域 (近24小时)
化学 材料科学 生物 医学 工程类 有机化学 生物化学 物理 纳米技术 计算机科学 内科学 化学工程 复合材料 基因 遗传学 物理化学 催化作用 量子力学 光电子学 冶金
热门帖子
关注 科研通微信公众号,转发送积分 3514713
求助须知:如何正确求助?哪些是违规求助? 3097077
关于积分的说明 9233948
捐赠科研通 2792083
什么是DOI,文献DOI怎么找? 1532271
邀请新用户注册赠送积分活动 711879
科研通“疑难数据库(出版商)”最低求助积分说明 707045