Repeat Next-Generation Sequencing Testing on Progression in Men With Metastatic Prostate Cancer Can Identify New Actionable Alterations

前列腺癌 微卫星不稳定性 医学 癌症 肿瘤科 内科学 DNA测序 生物信息学 计算生物学 微卫星 基因 生物 遗传学 等位基因
作者
Joseph J. Park,Shih-Chun A. Chu,Jinju Li,Alicia Ali,Rana R. McKay,Clara Hwang,Matthew Labriola,Albert Jang,Deepak Kilari,George Mo,Deepak Ravindranathan,Laura Graham,Alexandra Sokolova,Abhishek Tripathi,Amanda B. Pilling,Tanya Jindal,Aditya Ravindra,Frank C. Cackowski,Patrick L. Sweeney,Bicky Thapa,Taylor S. Amery,Elisabeth I. Heath,Rohan Garje,Yousef Zakharia,Vadim S. Koshkin,Mehmet Asım Bilen,Michael T. Schweizer,Pedro C. Barata,Tanya B. Dorff,Marcin Cieślik,Ajjai Alva,Andrew J. Armstrong
出处
期刊:JCO precision oncology [American Society of Clinical Oncology]
卷期号: (8) 被引量:8
标识
DOI:10.1200/po.23.00567
摘要

PURPOSE There are limited data available on the real-world patterns of molecular testing in men with advanced prostate cancer. We thus sought to evaluate next-generation sequencing (NGS) testing in the United States, focused on single versus serial NGS testing, the different disease states of testing (hormone-sensitive v castration-resistant, metastatic vs nonmetastatic), tissue versus plasma circulating tumor DNA (ctDNA) assays, and how often actionable data were found on each NGS test. METHODS The Prostate Cancer Precision Medicine Multi-Institutional Collaborative Effort clinical-genomic database was used for this retrospective analysis, including 1,597 patients across 15 institutions. Actionable NGS data were defined as including somatic alterations in homologous recombination repair genes, mismatch repair deficiency, microsatellite instability (MSI-high), or a high tumor mutational burden ≥10 mut/MB. RESULTS Serial NGS testing (two or more NGS tests with specimens collected more than 60 days apart) was performed in 9% (n = 144) of patients with a median of 182 days in between test results. For the second NGS test and beyond, 82.1% (225 of 274) of tests were from ctDNA assays and 76.1% (217 of 285) were collected in the metastatic castration-resistant setting. New actionable data were found on 11.1% (16 of 144) of second NGS tests, with 3.5% (5 of 144) of tests detecting a new BRCA2 alteration or MSI-high. A targeted therapy (poly (ADP-ribose) polymerase inhibitor or immunotherapy) was given after an actionable result on the second NGS test in 31.3% (5 of 16) of patients. CONCLUSION Repeat somatic NGS testing in men with prostate cancer is infrequently performed in practice and can identify new actionable alterations not present with initial testing, suggesting the utility of repeat molecular profiling with tissue or blood of men with metastatic castration-resistant prostate cancer to guide therapy choices.

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