[Microbial Community Structure and Diversity in Cellar Water by 16S rRNA High-throughput Sequencing].

蛋白质细菌 生物 放线菌门 拟杆菌 厚壁菌 反硝化细菌 硝基螺 疣状疣 芽单胞菌门 黄杆菌 寡养单胞菌 操作分类学单元 弓形菌属 单胞菌 微生物种群生物学 植物 16S核糖体RNA 微生物学 细菌 假单胞菌 反硝化 化学 氮气 有机化学 遗传学
作者
Hao Yang,Guozhen Zhang,Xiaoni Yang,Fuping Wu,Wei Zhao,Hongwei Zhang,Xiang Zhang
出处
期刊:PubMed 卷期号:38 (4): 1704-1716 被引量:22
标识
DOI:10.13227/j.hjkx.201608097
摘要

This study was aimed to explore the bacterial diversity of cellar water as well as to study the relationship between the bacterial diversity and environmental factors. The MiSeq high-throughput sequencing was used to analyze and compare the bacterial diversity and community composition of samples from different cellar water samples. Overall 1605 optimized reads were obtained from four samples based on high-throughput sequencing of the V4 region of the 16S rRNA gene. Bacterial species detected in these samples covered 22 phyla,42 classes,71 orders,115 families, 146 genera. Analysis showed that the bacterial diversity was very high in these samples, and there were differences among different samples. The distribution characteristics of the dominant bacteria showed patterns of a large number of rare species and a few common types. Taxonomic assignment analysis indicated that Bacteroidetes,Proteobacteria,Actinobacteria,Verrucomicrobia,OD1 dominated in the Cellar water, and accounted for 87.1% to 94.8% at phylum level. The predominant groups were Actinobacteria,Acidimicrobiia,Cytophagia, Flavobacteriia, Sphingobacteriia,α-Proteobacteria,β-Proteobacteria,γ-Proteobacteria,Opitutae, Verrucomicrobiae,Pedosphaerae and ZB2 at class level. At genus level Rhodobacter,Dechloromonas,Flavobacterium,Acinetobacter,Comamonas,Pseudomonas,Hydrogenophaga,et al were the abundant taxa, which were mainly denitrifying bacteria and heterotrophic nitrification-aerobic denitrification bacteria. The result of RDA suggested that the influences of different environmental factors on different microbes were different. Bacterial community Ⅱ had significant positive correlation with UV254,permanganate index,BOD5,and Bacterial community Ⅲ had significant positive correlation with TN,NO2--N,NO3--N,TP,NH4+-N. This research should deepen the understanding on microbial community in Cellar water, and provide references for the association of bacterial composition and diversity with environmental factors.

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