Lipid metabolism-related genes are involved in the occurrence of asthma and regulate the immune microenvironment

生物 免疫系统 转录组 基因 脂质代谢 CD8型 免疫学 RNA干扰 基因表达 遗传学 核糖核酸 内分泌学
作者
Yuanmin Jia,Haixia Wang,Bin Ma,Zeyi Zhang,Jingjing Wang,Jin Wang,Ou Chen
出处
期刊:BMC Genomics [BioMed Central]
卷期号:25 (1) 被引量:2
标识
DOI:10.1186/s12864-023-09795-3
摘要

Lipid metabolism plays a pivotal role in asthma pathogenesis. However, a comprehensive analysis of the importance of lipid metabolism-related genes (LMRGs) in regulating the immune microenvironment in asthma remains lacking. The transcriptome matrix was downloaded from the Gene Expression Omnibus (GEO) dataset. Differentially expressed analysis and weighted gene coexpression network analysis (WGCNA) were conducted on the GSE74986 dataset to select hub LMRGs, and gene set enrichment analysis (GSEA) was conducted to explore their biological functions. The CIBERSORT algorithm was used to determine immune infiltration in the asthma and control groups, and the correlation of diagnostic biomarkers and immune cells was performed via Spearman correlation analysis. Subsequently, a competitive endogenous RNA (ceRNA) network was constructed to investigate the hidden molecular mechanism of asthma. The expression levels of the hub genes were further validated in the GSE143192 dataset, and RT‒qPCR and immunofluorescence were performed to verify the reliability of the results in the OVA asthma model. Lastly, the ceRNA network was confirmed by qRT-PCR and RNAi experiments in the characteristic cytokine (IL-13)-induced asthma cellular model.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
传奇3应助丰富的绿茶采纳,获得10
1秒前
小太阳完成签到,获得积分10
1秒前
tongluobing完成签到,获得积分10
1秒前
3秒前
阿来完成签到,获得积分10
3秒前
3秒前
swy完成签到,获得积分10
3秒前
5秒前
研友_8926mL发布了新的文献求助10
5秒前
Lee完成签到,获得积分20
6秒前
small桐发布了新的文献求助20
7秒前
好滴捏发布了新的文献求助10
9秒前
10秒前
sxd发布了新的文献求助10
11秒前
11秒前
12秒前
ding应助月白采纳,获得10
12秒前
yi完成签到,获得积分10
12秒前
Akim应助阿龙采纳,获得10
13秒前
Tom完成签到,获得积分10
13秒前
14秒前
情怀应助淡淡红茶采纳,获得20
14秒前
14秒前
顾矜应助好滴捏采纳,获得10
15秒前
16秒前
科研通AI6.3应助张0采纳,获得10
16秒前
17秒前
丘比特应助烧麦采纳,获得10
17秒前
闷闷发布了新的文献求助10
19秒前
20秒前
adding发布了新的文献求助10
20秒前
烤豆腐发布了新的文献求助10
20秒前
21秒前
李爱国应助淡淡红茶采纳,获得10
21秒前
Gaowenjie发布了新的文献求助10
22秒前
思源应助郭郭郭采纳,获得10
23秒前
张岱帅z完成签到,获得积分0
24秒前
profit完成签到 ,获得积分10
24秒前
25秒前
安利完成签到,获得积分10
25秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Cowries - A Guide to the Gastropod Family Cypraeidae 1200
Quality by Design - An Indispensable Approach to Accelerate Biopharmaceutical Product Development 800
Pulse width control of a 3-phase inverter with non sinusoidal phase voltages 777
Signals, Systems, and Signal Processing 610
Research Methods for Applied Linguistics 500
Chemistry and Physics of Carbon Volume 15 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6396165
求助须知:如何正确求助?哪些是违规求助? 8211441
关于积分的说明 17393784
捐赠科研通 5449521
什么是DOI,文献DOI怎么找? 2880549
邀请新用户注册赠送积分活动 1857118
关于科研通互助平台的介绍 1699454