Lipid metabolism-related genes are involved in the occurrence of asthma and regulate the immune microenvironment

生物 免疫系统 转录组 基因 脂质代谢 CD8型 免疫学 RNA干扰 基因表达 遗传学 核糖核酸 内分泌学
作者
Yuanmin Jia,Haixia Wang,Bin Ma,Zeyi Zhang,Jingjing Wang,Jin Wang,Ou Chen
出处
期刊:BMC Genomics [BioMed Central]
卷期号:25 (1) 被引量:2
标识
DOI:10.1186/s12864-023-09795-3
摘要

Lipid metabolism plays a pivotal role in asthma pathogenesis. However, a comprehensive analysis of the importance of lipid metabolism-related genes (LMRGs) in regulating the immune microenvironment in asthma remains lacking. The transcriptome matrix was downloaded from the Gene Expression Omnibus (GEO) dataset. Differentially expressed analysis and weighted gene coexpression network analysis (WGCNA) were conducted on the GSE74986 dataset to select hub LMRGs, and gene set enrichment analysis (GSEA) was conducted to explore their biological functions. The CIBERSORT algorithm was used to determine immune infiltration in the asthma and control groups, and the correlation of diagnostic biomarkers and immune cells was performed via Spearman correlation analysis. Subsequently, a competitive endogenous RNA (ceRNA) network was constructed to investigate the hidden molecular mechanism of asthma. The expression levels of the hub genes were further validated in the GSE143192 dataset, and RT‒qPCR and immunofluorescence were performed to verify the reliability of the results in the OVA asthma model. Lastly, the ceRNA network was confirmed by qRT-PCR and RNAi experiments in the characteristic cytokine (IL-13)-induced asthma cellular model.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
王富贵完成签到,获得积分10
刚刚
Pomelo完成签到 ,获得积分10
2秒前
2秒前
3秒前
pz完成签到,获得积分10
3秒前
甜菜发布了新的文献求助10
4秒前
蒜蒜发布了新的文献求助10
4秒前
zzjjyy完成签到,获得积分10
5秒前
杏林完成签到,获得积分10
5秒前
shicheng完成签到,获得积分20
6秒前
6秒前
7秒前
丰富达发布了新的文献求助10
7秒前
李贾美完成签到,获得积分10
8秒前
啦啦啦发布了新的文献求助10
8秒前
DL关闭了DL文献求助
9秒前
飞快的大炮完成签到,获得积分10
10秒前
杨光发布了新的文献求助10
10秒前
香蕉觅云应助神雕001采纳,获得10
10秒前
11秒前
12秒前
hh完成签到,获得积分10
12秒前
希望天下0贩的0应助上冬采纳,获得10
12秒前
13秒前
士艳完成签到,获得积分10
16秒前
无心的水桃发布了新的文献求助150
16秒前
泡芙完成签到 ,获得积分10
17秒前
XYX完成签到,获得积分10
18秒前
空空完成签到,获得积分10
18秒前
18秒前
JimmyC完成签到,获得积分10
19秒前
hani发布了新的文献求助10
19秒前
19秒前
21秒前
rueh发布了新的文献求助10
22秒前
是个宝耶完成签到 ,获得积分10
22秒前
23秒前
OrangeLight完成签到,获得积分10
23秒前
Akim应助bababoi采纳,获得10
23秒前
24秒前
高分求助中
Principles of Economics, 11th Edition 10000
University Physics with Modern Physics, 16th edition 10000
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Arthritis and Related Conditions, An Issue of Orthopedic Clinics 1000
Development of a Bridge Weigh-In-Motion System: A technology to convert the bridge response to the passage of traffic into data on vehicle configurations, speeds, times of travel and weights 1000
ズームレンズの光学設計に関する研究 800
Fundamentals of Pharmaceutical and Biologics Regulations: A Global Perspective, Second Edition 700
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7287753
求助须知:如何正确求助?哪些是违规求助? 8907489
关于积分的说明 18851617
捐赠科研通 6956514
什么是DOI,文献DOI怎么找? 3208711
关于科研通互助平台的介绍 2378546
邀请新用户注册赠送积分活动 2184481