Screening Differential CircRNAs Expression Profiles Reveals the Regulatory Role of the has_circTPT1_003–has-miR-218-5p–CCNE2/SMC4 Signaling Axis in Bladder Carcinoma Progression

生物 小桶 小RNA 环状RNA 膀胱癌 基因 计算生物学 癌症研究 癌症 下调和上调 基因表达 折叠变化 分子生物学 基因本体论 遗传学
作者
Jie Wang,Jichun Shao,Yuan Lu,Weipeng Su,Huiyue Dong,Ping Wang,Zhijie Lin,Jing Feng,Dong Wang,Hu Zhao,Ming Jen Tan
出处
期刊:DNA and Cell Biology [Mary Ann Liebert, Inc.]
卷期号:41 (2): 128-141 被引量:4
标识
DOI:10.1089/dna.2021.0240
摘要

Circular RNAs (circRNAs) are a class of noncoding RNAs closely related to the development and progression of various human cancers. However, it is unclear whether circRNAs play an important role in the development of bladder cancer. We utilized human circRNA array V2 microarrays to screen circRNA expression profiles in bladder cancer tissues. Bioinformatic tools including circBank, dbDEMC 2.0, miRCancer, TarBase v7.0, miRtarbase, TCGA-BLCA, Cytoscape-MCODE, String, ENCORI, and Venny 2.1 were then employed to construct the circRNA-miRNA-mRNA regulatory networks. In total, 105 upregulated circRNAs and 167 downregulated circRNAs (fold change >2 and p < 0.001) were filtered out. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of filtered dysregulated circRNAs disclosed that the circRNAs regulatory network was closely related with mRNA processing and cell cycle, etc. Further excavation analysis showed that seven differentially overexpressed circRNAs including hsa_circ_0000133, hsa_circ_0023610, hsa_circ_0005615, hsa_circ_0030162, hsa_circ_0077007, hsa_circ_0001140, and hsa_circ_0107031 were associated with bladder cancer invasiveness, and the cell cycle signal axis. has_circTPT1_003-has-miR-218-5p-CCNE2/SMC4 was finally clarified as a possible mechanism for bladder cancer progression. Based on results derived from multiple approaches, we identified that has_circTPT1_003-has-miR-218-5p-CCNE2/SMC4 signal axis may be involved in the invasion process of bladder cancer.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
Orange应助聚合酶链式反应采纳,获得10
刚刚
提拉米草发布了新的文献求助10
刚刚
CodeCraft应助甜心椰奶莓莓采纳,获得10
2秒前
今后应助奋斗的萝采纳,获得10
2秒前
3秒前
淡淡菠萝发布了新的文献求助10
3秒前
正直听白发布了新的文献求助10
3秒前
珊迪发布了新的文献求助10
3秒前
研友_VZG64n完成签到,获得积分10
3秒前
烟花应助Pendragon采纳,获得30
3秒前
雪白的之桃完成签到,获得积分10
4秒前
5秒前
情怀应助gwt采纳,获得10
5秒前
5秒前
花椒最菜的硕士完成签到,获得积分10
6秒前
6秒前
Perrylin718完成签到,获得积分10
7秒前
star发布了新的文献求助10
9秒前
张木木完成签到,获得积分10
10秒前
qwq完成签到,获得积分10
11秒前
阿鹿发布了新的文献求助10
11秒前
影子芳香完成签到 ,获得积分10
12秒前
polystyrene发布了新的文献求助10
12秒前
12秒前
chenxz发布了新的文献求助10
12秒前
Ahern完成签到,获得积分10
12秒前
Pluto发布了新的文献求助10
13秒前
13秒前
忘川完成签到 ,获得积分10
13秒前
Ahern发布了新的文献求助10
15秒前
15秒前
迪兒完成签到,获得积分10
15秒前
星辰大海应助顺利青槐采纳,获得10
16秒前
Ava应助机饭团采纳,获得10
16秒前
张木木发布了新的文献求助10
16秒前
咖喱咖喱发布了新的文献求助10
16秒前
18秒前
迪兒发布了新的文献求助10
19秒前
20秒前
fyq发布了新的文献求助10
21秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Cowries - A Guide to the Gastropod Family Cypraeidae 1200
Quality by Design - An Indispensable Approach to Accelerate Biopharmaceutical Product Development 800
Pulse width control of a 3-phase inverter with non sinusoidal phase voltages 777
Signals, Systems, and Signal Processing 610
A Social and Cultural History of the Hellenistic World 500
Chemistry and Physics of Carbon Volume 15 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6397529
求助须知:如何正确求助?哪些是违规求助? 8212793
关于积分的说明 17401122
捐赠科研通 5450855
什么是DOI,文献DOI怎么找? 2881103
邀请新用户注册赠送积分活动 1857661
关于科研通互助平台的介绍 1699693