生物
基因组学
系统发育树
比较基因组学
可视化
基因组
计算生物学
鉴定(生物学)
数据集成
数据可视化
数据科学
进化生物学
计算机科学
基因
遗传学
数据挖掘
生态学
作者
Jiahe Sun,Fang Lü,Yongjiang Luo,Lingzi Bie,Limei Xu,Yi Wang
摘要
Abstract Advancements in comparative genomics research have led to a growing interest in studying species evolution and genetic diversity. To facilitate this research, OrthoVenn3 has been developed as a powerful, web-based tool that enables users to efficiently identify and annotate orthologous clusters and infer phylogenetic relationships across a range of species. The latest upgrade of OrthoVenn includes several important new features, including enhanced orthologous cluster identification accuracy, improved visualization capabilities for numerous sets of data, and wrapped phylogenetic analysis. Furthermore, OrthoVenn3 now provides gene family contraction and expansion analysis to support researchers better understanding the evolutionary history of gene families, as well as collinearity analysis to detect conserved and variable genomic structures. With its intuitive user interface and robust functionality, OrthoVenn3 is a valuable resource for comparative genomics research. The tool is freely accessible at https://orthovenn3.bioinfotoolkits.net.
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