DP-GEN: A concurrent learning platform for the generation of reliable deep learning based potential energy models

计算机科学 深度学习 人工智能 能量(信号处理) 物理 量子力学
作者
Yuzhi Zhang,Haidi Wang,Haidi Wang,Weijie Chen,Jinzhe Zeng,Linfeng Zhang,Han Wang,Han Wang,E Weinan
出处
期刊:Computer Physics Communications [Elsevier BV]
卷期号:253: 107206-107206 被引量:832
标识
DOI:10.1016/j.cpc.2020.107206
摘要

In recent years, promising deep learning based interatomic potential energy surface (PES) models have been proposed that can potentially allow us to perform molecular dynamics simulations for large scale systems with quantum accuracy. However, making these models truly reliable and practically useful is still a very non-trivial task. A key component in this task is the generation of datasets used in model training. In this paper, we introduce the Deep Potential GENerator (DP-GEN), an open-source software platform that implements the recently proposed ”on-the-fly” learning procedure (Zhang et al. 2019) and is capable of generating uniformly accurate deep learning based PES models in a way that minimizes human intervention and the computational cost for data generation and model training. DP-GEN automatically and iteratively performs three steps: exploration, labeling, and training. It supports various popular packages for these three steps: LAMMPS for exploration, Quantum Espresso, VASP, CP2K, etc. for labeling, and DeePMD-kit for training. It also allows automatic job submission and result collection on different types of machines, such as high performance clusters and cloud machines, and is adaptive to different job management tools, including Slurm, PBS, and LSF. As a concrete example, we illustrate the details of the process for generating a general-purpose PES model for Cu using DP-GEN. Program Title: DP-GEN Program Files doi: http://dx.doi.org/10.17632/sxybkgc5xc.1 Licensing provisions: LGPL Programming language: Python Nature of problem: Generating reliable deep learning based potential energy models with minimal human intervention and computational cost. Solution method: The concurrent learning scheme is implemented. Supports for sampling configuration space with LAMMPS, generating ab initio data with Quantum Espresso, VASP, CP2K and training potential models with DeePMD-kit are provided. Supports for different machines including workstations, high performance clusters and cloud machines are provided. Supports for job management tools including Slurm, PBS, LSF are provided.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
luckybei发布了新的文献求助10
1秒前
1秒前
cling完成签到,获得积分10
1秒前
1秒前
viper3完成签到,获得积分10
2秒前
初青酱完成签到,获得积分10
3秒前
小野完成签到,获得积分10
3秒前
viper3发布了新的文献求助10
5秒前
6秒前
7秒前
peral发布了新的文献求助30
8秒前
8秒前
GingerF应助镜染采纳,获得50
9秒前
熠熠生辉完成签到,获得积分20
9秒前
Qiao_ZH发布了新的文献求助10
12秒前
心灵美的不斜完成签到 ,获得积分10
13秒前
zsy发布了新的文献求助10
14秒前
15秒前
liu完成签到,获得积分10
15秒前
16秒前
夏晴晴完成签到,获得积分10
18秒前
尊敬芙蓉发布了新的文献求助10
18秒前
天桂星完成签到,获得积分10
19秒前
阳光的衫完成签到,获得积分10
19秒前
zx完成签到,获得积分10
20秒前
20秒前
天天快乐应助读书高采纳,获得10
21秒前
22秒前
peral完成签到,获得积分10
22秒前
24秒前
迅速道之完成签到,获得积分10
24秒前
24秒前
新八完成签到,获得积分10
24秒前
树上香蕉果完成签到,获得积分10
25秒前
fine发布了新的文献求助10
26秒前
XH完成签到,获得积分10
27秒前
争气发布了新的文献求助10
27秒前
赘婿应助熠熠生辉采纳,获得10
28秒前
zsy完成签到,获得积分10
28秒前
万能图书馆应助可靠安寒采纳,获得10
29秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Developing Genetic Editing Tools for Lysobacter 2000
卤化钙钛矿人工突触的研究 2000
Моделирование процессов самоорганизации в кристаллообразующих системах 1000
History of U.S. Space Surveillance and Satellite Cataloging 1000
Signals, Systems, and Signal Processing 610
Fundamentals of Pharmaceutical and Biologics Regulations: A Global Perspective, Second Edition 600
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6516348
求助须知:如何正确求助?哪些是违规求助? 8309282
关于积分的说明 17760942
捐赠科研通 5618625
什么是DOI,文献DOI怎么找? 2925411
邀请新用户注册赠送积分活动 1902456
关于科研通互助平台的介绍 1763580