Rapid Discovery of Glycocins through Pathway Refactoring in Escherichia coli

大肠杆菌 细菌素 计算生物学 生物 重构代码 抗菌剂 基因 基因组 药物发现 丝氨酸 金黄色葡萄球菌 抗生素 微生物学 遗传学 生物化学 细菌 程序设计语言 软件 计算机科学
作者
Hengqian Ren,Subhanip Biswas,Sherri Ho,Wilfred A. van der Donk,Huimin Zhao
出处
期刊:ACS Chemical Biology [American Chemical Society]
卷期号:13 (10): 2966-2972 被引量:41
标识
DOI:10.1021/acschembio.8b00599
摘要

Glycocins (glycosylated bacteriocins) are a family of ribosomally synthesized and post-translationally modified peptides with antimicrobial activities against pathogens of interest, including methicillin-resistant Staphylococcus aureus, representing a promising source of new antibiotics. Glycocins are still largely underexplored, and thus far, only six glycocins are known. Here, we used genome mining to identify 50 putative glycocin biosynthetic gene clusters and then chose six of them with distinct features for further investigation. Through two rounds of plug-and-play pathway refactoring and expression in Escherichia coli BL21(DE3), four systems produced novel glycocins. Further structural characterization revealed that one of them, which belongs to the enterocin 96-type glycocins, was diglucosylated on a single serine. The other three compounds belong to the SunA/ThuA-type glycocins and exhibit a antimicrobial spectrum narrower than that of sublancin, the best characterized member in this group, even though they share a similar disulfide topology and glycosylation. Further evaluation of their bioactivities with free glucose at high concentrations suggested that their antimicrobial mechanisms might be both glycocin- and species-specific. These glycocins with distinct features significantly broaden our knowledge and may lead to the discovery of new classes of antibiotics.
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