Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein

缓行 生物 隐生 基因 基因组 基因表达 基因敲除 遗传学 细胞生物学 生态学 干燥
作者
Takuma Hashimoto,Daiki D. Horikawa,Yuki Saito,Hirokazu Kuwahara,Hiroko Kozuka‐Hata,Tadasu Shin‐I,Yohei Minakuchi,Kazuko Ohishi,Ayuko Motoyama,Tomoyuki Aizu,Atsushi Enomoto,Koyuki Kondo,Sae Tanaka,Yuichiro Hara,Shigeyuki Koshikawa,Hiroshi Sagara,Toru Miura,Shin‐ichi Yokobori,Kiyoshi Miyagawa,Yutaka Suzuki,Takeo Kubo,Masaaki Oyama,Yuji Kohara,Asao Fujiyama,Kazuharu Arakawa,Toshiaki Katayama,Atsushi Toyoda,Takekazu Kunieda
出处
期刊:Nature Communications [Nature Portfolio]
卷期号:7 (1) 被引量:336
标识
DOI:10.1038/ncomms12808
摘要

Tardigrades, also known as water bears, are small aquatic animals. Some tardigrade species tolerate almost complete dehydration and exhibit extraordinary tolerance to various physical extremes in the dehydrated state. Here we determine a high-quality genome sequence of Ramazzottius varieornatus, one of the most stress-tolerant tardigrade species. Precise gene repertoire analyses reveal the presence of a small proportion (1.2% or less) of putative foreign genes, loss of gene pathways that promote stress damage, expansion of gene families related to ameliorating damage, and evolution and high expression of novel tardigrade-unique proteins. Minor changes in the gene expression profiles during dehydration and rehydration suggest constitutive expression of tolerance-related genes. Using human cultured cells, we demonstrate that a tardigrade-unique DNA-associating protein suppresses X-ray-induced DNA damage by ∼40% and improves radiotolerance. These findings indicate the relevance of tardigrade-unique proteins to tolerability and tardigrades could be a bountiful source of new protection genes and mechanisms. Tardigrades are resistant to extreme environmental conditions including dehydration, radiation and the vacuum of space. Here the authors present a high-quality genome which displays minimal horizontal gene transfer, and identify the unique tardigrade protein Dsup which suppresses DNA damage.
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