Enhanced detection of RNA modifications and read mapping with high-accuracy nanopore RNA basecalling models
生物
核糖核酸
计算生物学
纳米孔测序
遗传学
基因
DNA测序
作者
Gregor Diensthuber,Leszek P. Pryszcz,Laia Llovera,Morghan C. Lucas,Anna Delgado-Tejedor,Sonia Cruciani,Jean‐Yves Roignant,Oguzhan Begik,Eva Maria Novoa
出处
期刊:Genome Research [Cold Spring Harbor Laboratory] 日期:2024-09-13卷期号:34 (11): 1865-1877被引量:7
In recent years, nanopore direct RNA sequencing (DRS) became a valuable tool for studying the epitranscriptome, owing to its ability to detect multiple modifications within the same full-length native RNA molecules. Although RNA modifications can be identified in the form of systematic basecalling "errors" in DRS data sets,