Unveiling HOXB7 as a novel diagnostic and prognostic biomarker through pan-cancer computer screening

生物标志物 免疫系统 免疫疗法 微卫星不稳定性 癌症 肿瘤微环境 医学 生存分析 疾病 癌症研究 肿瘤科 免疫学 基因 内科学 生物 遗传学 等位基因 微卫星
作者
Cong Li,Xulong Mao,Lanlan Song,Jueqi Sheng,Lehe Yang,Xiaoying Huang,Liangxing Wang
出处
期刊:Computers in Biology and Medicine [Elsevier BV]
卷期号:176: 108562-108562
标识
DOI:10.1016/j.compbiomed.2024.108562
摘要

We attempted to investigate the role of HOXB7 in tumor progression and evolution by means of an extensive computer screening analysis of various cancer types. We performed univariate Cox regression and Kaplan-Meier survival analyses to assess the impact of HOXB7 on overall survival (OS), disease-specific survival (DSS), and progression-free interval (PFI) in different types of cancer. Furthermore, we examined the relationship between HOXB7 and several clinical features: tumor microenvironment, immune regulatory genes, immune checkpoints, tumor mutational burden (TMB), and microsatellite instability (MSI). We performed gene set enrichment analysis to gain deeper insights into the potential molecular mechanisms of HOXB7, and validated our findings through functional assays in cells, including methyl thiazolyl tetrazolium cytotoxicity and Transwell invasion assays. HOXB7 expression was associated with different clinical characteristics in numerous malignancies. Higher HOXB7 expression was associated with worse OS, DSS, and PFI in some cancer types. In particular, HOXB7 expression was favorably associated with immune cell infiltration, immune regulatory genes, immunological checkpoints, TMB, and MSI in malignancies. Furthermore, we identified a strong link between copper death-associated gene expression and HOXB7 expression. According to the findings of this study, HOXB7 might serve as an appealing focus for tumor diagnosis and immunotherapy and a prospective indicator of prognosis.
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