ContactAngleCalculator: An Automated, Parametrized, and Flexible Code for Contact Angle Estimation in Visual Molecular Dynamics

接触角 计算机科学 过程(计算) 粒度 分子动力学 编码(集合论) 人工智能 生物系统 材料科学 物理 量子力学 生物 操作系统 复合材料 集合(抽象数据类型) 程序设计语言
作者
Yuxiang Wang,Alper Kızıltaş,P. Blanchard,Tiffany R. Walsh
出处
期刊:Journal of Chemical Information and Modeling [American Chemical Society]
卷期号:62 (24): 6302-6308 被引量:12
标识
DOI:10.1021/acs.jcim.2c00408
摘要

Accurate, fast, and flexible approaches for contact angle estimation in molecular dynamics simulations are of great importance for characterization of surface wettability, especially for machine learning approaches which would usually require thousands of computational contact angle evaluations for training and prediction purposes. However, evaluation of the contact angle from molecular simulations is typically a human-intensive process, which hinders the required fast throughput. To address this challenge, here a flexible and automated contact angle estimation tool, ContactAngleCalculator, is developed to meet these new requirements. In contrast to the current widely used computational approaches that are laborious and human intensive, this code is based on the concepts of the coarse-graining technique and equivalent contact area and volume of the droplet. Once the parameters are determined for a target liquid, it can automatically estimate the contact angle of different time points of one case or multiple cases by only one click. This tool is targeted for integration with machine learning methods, in which it can substantially streamline and reduce human labor and time in a computational contact angle estimation.
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