Novel disulfidptosis‐derived gene blueprint stratifying patients with breast cancer

乳腺癌 肿瘤科 免疫系统 基因签名 比例危险模型 内科学 CD8型 癌症 生物 医学 基因 免疫学 基因表达 遗传学
作者
Xiaojiang Tang,Baohua Ping,Yang Liu,Yuhui Zhou
出处
期刊:Environmental Toxicology [Wiley]
被引量:2
标识
DOI:10.1002/tox.24043
摘要

Abstract Introduction Breast cancer remains the predominant cancer among females, accounting for about 24.2% of all cancer cases. Alarmingly, it is the primary cause of cancer‐related mortality in women under 45. Methods This research analyzed RNA sequencing data from 1082 TCGA‐BRCA and 107 GSE58812 breast cancer patients. Single‐cell RNA data from five patients in the GSE118389 data set were also studied. Using Random forest and COX regression, we developed a prognostic model. Pathway analysis employed GSVA and GO, while immune profiles were assessed via ssGSEA and MCPcounter. Mutation patterns utilized maftools, and drug sensitivity scores were derived from the GDSC database with oncoPredict. Results Analysis of the GSE118389 data set identified three distinct cell types: immune, epithelial, and stromal. P53 and VEGF were notably enriched. Five key genes (TMEM251, ADAMTSL2, CDC123, PSMD1, TLE1) were pinpointed for their prognostic significance. We introduced a disulfidptosis‐associated score as a novel risk factor for breast cancer prognosis. Survival outcomes varied significantly between training and validation sets. Comprehensive immune profiling revealed no difference in activated CD8‐positive T cells between risk groups, but a positive correlation of NK cells, neutrophils, cytotoxic lymphocytes, and monocytic cells with the riskscore was noted. Importantly, a negative association between the drug Nelarabine and riskscore was identified. Conclusion This research underscores the significance of a disulfidptosis‐associated gene signature in breast cancer prognosis.
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