Visual identification for species and sex derived from bloodstain based on phosphate-mediated isothermal amplification colorimetric system

化学 环介导等温扩增 磷酸盐 鉴定(生物学) 等温过程 计算生物学 生物化学 DNA 热力学 生态学 物理 生物
作者
Wenjing Hu,Junli Li,Junli Li,Junli Li,Wei Wang,Xiaonan Liu,Jiangwei Yan
出处
期刊:Talanta [Elsevier]
卷期号:275: 126149-126149
标识
DOI:10.1016/j.talanta.2024.126149
摘要

Species and sex confirmation of the biological specimen play a crucial role in crime investigation. However, the specimen found in the scene is always trace quantity, which is hard to be analyzed by current methods. Moreover, the time-consuming DNA extraction, sophisticated apparatus, and complex data processing make it difficult to satisfy the demand of speediness and convenience for point-of-care tests. In this study, we first exhibit a phosphate-based visual system for field-based species and sex identification derived from trace bloodstain. By introducing phosphate ion-based colorimetry into loop-mediated isothermal amplification (LAMP) for result interpretation, not only the bloodstain can be directly submitted to mitochondrial variant amplification owing to the enhanced amplification efficiency by pyrophosphate ion hydrolyzation, but also the colorimetric signal can be recognized by the naked eye for result output within 30 min through molybdophosphate generation. Aerosol contamination, the major conflict of LAMP, has been solved once and for all by integrating uracil-DNA glycosylase into this system that still holds on a constant temperature. As a demonstration, cytochrome b and Y-chromosomal amelogenin are employed to identify species and sex respectively, which has achieved a highly sensitive and specific distinguishability under a strong interferential background. Accurate results can be obtained from both the simulative degraded and dated specimen, which indicates that this novel system may serve as a promising tool in forensic practice.
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