纤维化
数字图像分析
染色
病理
数字化病理学
发病机制
分割
计算机科学
计算生物学
生物医学工程
医学
生物
人工智能
计算机视觉
作者
Guillaume E. Courtoy,Isabelle Leclercq,Antoine Froidure,Guglielmo Schiano,Johann Morelle,Olivier Devuyst,François Huaux,Caroline Bouzin
出处
期刊:Biomolecules
[Multidisciplinary Digital Publishing Institute]
日期:2020-11-22
卷期号:10 (11): 1585-1585
被引量:53
摘要
Current understanding of fibrosis remains incomplete despite the increasing burden of related diseases. Preclinical models are used to dissect the pathogenesis and dynamics of fibrosis, and to evaluate anti-fibrotic therapies. These studies require objective and accurate measurements of fibrosis. Existing histological quantification methods are operator-dependent, organ-specific, and/or need advanced equipment. Therefore, we developed a robust, minimally operator-dependent, and tissue-transposable digital method for fibrosis quantification. The proposed method involves a novel algorithm for more specific and more sensitive detection of collagen fibers stained by picrosirius red (PSR), a computer-assisted segmentation of histological structures, and a new automated morphological classification of fibers according to their compactness. The new algorithm proved more accurate than classical filtering using principal color component (red-green-blue; RGB) for PSR detection. We applied this new method on established mouse models of liver, lung, and kidney fibrosis and demonstrated its validity by evidencing topological collagen accumulation in relevant histological compartments. Our data also showed an overall accumulation of compact fibers concomitant with worsening fibrosis and evidenced topological changes in fiber compactness proper to each model. In conclusion, we describe here a robust digital method for fibrosis analysis allowing accurate quantification, pattern recognition, and multi-organ comparisons useful to understand fibrosis dynamics.
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