生物扩散
生物
按距离隔离
遗传结构
地理距离
微卫星
遗传距离
生态学
层次聚类
线粒体DNA
聚类分析
人口
遗传变异
进化生物学
统计
遗传学
人口学
数学
等位基因
社会学
基因
作者
Ashlee Shipham,Daniel J. Schmidt,Jane Hughes
标识
DOI:10.1093/jhered/est055
摘要
Recent work has highlighted the need to account for hierarchical patterns of genetic structure when estimating evolutionary and ecological parameters of interest. This caution is particularly relevant to studies of riverine organisms, where hierarchical structure appears to be commonplace. Here, we indirectly estimate dispersal distance in a hierarchically structured freshwater fish, Mogurnda adspersa. Microsatellite and mitochondrial DNA (mtDNA) data were obtained for 443 individuals across 27 sites separated by an average of 1.3 km within creeks of southeastern Queensland, Australia. Significant genetic structure was found among sites (mtDNA ΦST = 0.508; microsatellite FST = 0.225, F′ST = 0.340). Various clustering methods produced congruent patterns of hierarchical structure reflecting stream architecture. Partial mantel tests identified contiguous sets of sample sites where isolation by distance (IBD) explained FST variation without significant contribution of hierarchical structure. Analysis of mean natal dispersal distance (σ) within sets of IBD-linked sample sites suggested most dispersal occurs over less than 1 km, and the average effective density (De) was estimated at 11.5 individuals km−1; indicating sedentary behavior and small effective population size are responsible for the remarkable patterns of genetic structure observed. Our results demonstrate that Rousset’s regression-based method is applicable to estimating the scale of dispersal in riverine organisms and that identifying contiguous populations that satisfy the assumptions of this model is achievable with genetic clustering methods and partial correlations.
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