Involvement of CircRNA Expression Profile in Diabetic Retinopathy and Its Potential Diagnostic Value

环状RNA 折叠变化 小桶 小RNA 微阵列 微阵列分析技术 生物 基因 核糖核酸 糖尿病性视网膜病变 基因表达 计算生物学 生物信息学 分子生物学 癌症研究
作者
Hengqian He,Juntao Zhang,Wei Gong,Mengyun Liu,Hao Líu,Xiaoyong Li,Yufei Wu,Qianqian Lü
出处
期刊:Frontiers in Genetics [Frontiers Media]
卷期号:13 被引量:7
标识
DOI:10.3389/fgene.2022.833573
摘要

Background: Circular RNAs (circRNAs), a class of non-coding and undegradable RNAs, play many pathological functions by acting as miRNA sponges, interacting with RNA-binding proteins, and others. The recent literature indicates that circRNAs possess the advanced superiority for the early screening of diabetic retinopathy (DR). Methods: CircRNA sources of peripheral blood mononuclear cells (PBMCs) from healthy controls (n = 4), diabetes mellitus patients (DM) (n = 4), and DR patients (n = 4) were extracted for circular RNA microarray analysis. Enriched biological modules and signaling pathways were analyzed by Gene Ontology Enrichment and Kyoto Encyclopedia of Genes and Genomes analysis, respectively. Real-time quantitative reverse transcription PCR (RT-qPCR) was performed to validate differentiated levels of several circRNAs (fold change ≥2, p < .05) in different groups of healthy control subjects (n = 20), DM patients (n = 60), and DR patients (n = 42). Based on our clinical data from DR, the diagnostic performance of candidate circRNAs was measured by operating characteristic curves (ROCs). Subsequently, their circRNA-miRNA networks were constructed by bioinformatics analysis. Results: Circular RNA microarray analysis was performed, and 2,452 and 289 circRNAs were screened with differential expression in DR patients compared to healthy controls and DM patients, respectively. Enrichment analyses showed that circRNAs in DR patients were enriched in extracellular matrix (ECM)-receptor interaction and focal adhesion pathways. The top 5 differential circRNAs in circRNA microarray analysis were subsequently quantified and verified by RT-qPCR. Consistently, a significant 2.2-fold reduction of hsa_circ_0095008 and 1.7-fold increase in hsa_circ_0001883 were identified in DR patients compared to DM patients. Meanwhile, the area under curves of hsa_circ_0095008 and hsa_circ_0001883 were 0.6710 (95% CI, 0.5646-0.7775) (p = 0.003399) and 0.6071 (95% CI, 0.4953-0.7189) (p = 0.06644), respectively, indicating a good diagnostic value. Conclusion: Our study provided a new sight for the pathological mechanism of DR and revealed the potential value of hsa_circ_0095008 and hsa_circ_0001883 as diagnostic biomarkers for the early diagnosis of DR patients.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
wanci应助月之暗面采纳,获得10
刚刚
zhizhi完成签到,获得积分10
1秒前
wqkkk完成签到,获得积分10
1秒前
Feng发布了新的文献求助20
2秒前
2秒前
2秒前
情怀应助123采纳,获得10
2秒前
量子星尘发布了新的文献求助10
2秒前
2秒前
静心安逸完成签到,获得积分10
2秒前
李健的粉丝团团长应助hh采纳,获得10
3秒前
隐形曼青应助滴滴滴采纳,获得10
3秒前
任性的蝴蝶完成签到,获得积分10
3秒前
han发布了新的文献求助10
3秒前
卷卷完成签到 ,获得积分10
4秒前
4秒前
4秒前
ethen完成签到,获得积分10
5秒前
5秒前
5秒前
li完成签到 ,获得积分10
5秒前
玛丽发布了新的文献求助20
5秒前
Will完成签到,获得积分10
5秒前
tutu完成签到,获得积分10
6秒前
6秒前
Anthony发布了新的文献求助10
6秒前
含糊的鞋垫完成签到,获得积分10
6秒前
Lucas应助TobyGarfielD采纳,获得10
6秒前
坦率的文龙完成签到,获得积分10
6秒前
贺宁杰完成签到,获得积分10
6秒前
7秒前
7秒前
干净白容发布了新的文献求助10
8秒前
8秒前
Akim应助lzcnextdoor采纳,获得10
8秒前
tutu发布了新的文献求助10
9秒前
torfun发布了新的文献求助10
9秒前
雨林发布了新的文献求助10
10秒前
燕儿应助嗦了蜜采纳,获得10
10秒前
xy发布了新的文献求助30
10秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
网络安全 SEMI 标准 ( SEMI E187, SEMI E188 and SEMI E191.) 1000
计划经济时代的工厂管理与工人状况(1949-1966)——以郑州市国营工厂为例 500
INQUIRY-BASED PEDAGOGY TO SUPPORT STEM LEARNING AND 21ST CENTURY SKILLS: PREPARING NEW TEACHERS TO IMPLEMENT PROJECT AND PROBLEM-BASED LEARNING 500
Why America Can't Retrench (And How it Might) 400
Two New β-Class Milbemycins from Streptomyces bingchenggensis: Fermentation, Isolation, Structure Elucidation and Biological Properties 300
Modern Britain, 1750 to the Present (第2版) 300
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 生物化学 物理 纳米技术 计算机科学 内科学 化学工程 复合材料 物理化学 基因 催化作用 遗传学 冶金 电极 光电子学
热门帖子
关注 科研通微信公众号,转发送积分 4615303
求助须知:如何正确求助?哪些是违规求助? 4019099
关于积分的说明 12440991
捐赠科研通 3702052
什么是DOI,文献DOI怎么找? 2041414
邀请新用户注册赠送积分活动 1074129
科研通“疑难数据库(出版商)”最低求助积分说明 957743