计算机科学
工作流程
灵活性(工程)
接口(物质)
Web服务器
Web应用程序
R包
万维网
数据库
操作系统
互联网
程序设计语言
数学
统计
最大气泡压力法
气泡
作者
Jasmine Chong,Jianguo Xia
出处
期刊:Bioinformatics
[Oxford University Press]
日期:2018-06-28
卷期号:34 (24): 4313-4314
被引量:542
标识
DOI:10.1093/bioinformatics/bty528
摘要
The MetaboAnalyst web application has been widely used for metabolomics data analysis and interpretation. Despite its user-friendliness, the web interface has presented its inherent limitations (especially for advanced users) with regard to flexibility in creating customized workflow, support for reproducible analysis, and capacity in dealing with large data. To address these limitations, we have developed a companion R package (MetaboAnalystR) based on the R code base of the web server. The package has been thoroughly tested to ensure that the same R commands will produce identical results from both interfaces. MetaboAnalystR complements the MetaboAnalyst web server to facilitate transparent, flexible and reproducible analysis of metabolomics data.MetaboAnalystR is freely available from https://github.com/xia-lab/MetaboAnalystR.
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