Host–guest binding selectivity of ethylated pillar[5]arene (EtP5A) towards octane, 1,7-octadiene, and 1,7-octadiyne: a computational investigation

化学 支柱 辛烷值 选择性 计算化学 立体化学
作者
Adel Krid,Lotfi Belkhiri,Hamza Allal,Aleksey E. Kuznetsov,Abdou Boucekkine
出处
期刊:Structural Chemistry [Springer Nature]
卷期号:34 (2): 625-638
标识
DOI:10.1007/s11224-022-02002-1
摘要

Host–guest binding selectivity of the perethylated pillar[5]arene (EtP5A) macrocycles with aliphatic modified hydrocarbons, i.e., octane, 1,7-octadiene, and 1,7-octadiyne as guests, has been investigated computationally employing molecular docking simulations. Density functional theory (DFT) investigations were also performed on these host–guest complexes using the dispersion-corrected approach BLYP-D3(BJ)/TZP/COSMO calculations as implemented in the ADF program and two dispersion-corrected density functionals, ωB97XD and B97D, along with the 6-311G* basis set, coupled with the PCM solvation model as implemented in the Gaussian software. We performed analysis of the frontier molecular orbitals (FMO) and natural bond orbitals (NBO), energy decomposition analysis (EDA), and noncovalent interaction (NCI-RDG) analysis. The study sheds light on the structures and binding energetics of EtP5A with the above-mentioned guests as well as on the physicochemical nature of the noncovalent interactions involved in these host–guest inclusion complexes. Based on the docking simulations, the EtP5A host revealed slightly better binding ability in the complex with the alkyne guest than with the octane and alkene, as corroborated by the EDA analysis. The results showed that the complexation of EtP5A with the hydrocarbons is mainly governed by the interplay of electrostatic interactions and dispersive noncovalent interactions. These results agree well with NCI-RDG and NBO analysis showing that host–guest binding interactions result predominantly from electrostatic C-H···π and van der Waals interactions, the H-bonding being weak or not observed. The results obtained using different computational methods were found to be in good agreement and complementary.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
strawberry完成签到,获得积分10
1秒前
panda发布了新的文献求助10
3秒前
Sivledy完成签到,获得积分10
4秒前
4秒前
wuyu发布了新的文献求助10
4秒前
LXR发布了新的文献求助10
4秒前
4秒前
5秒前
多金多金完成签到 ,获得积分10
7秒前
自信石头发布了新的文献求助10
7秒前
吧唧发布了新的文献求助10
8秒前
传奇3应助强健的匕采纳,获得10
8秒前
深情安青应助对映体采纳,获得10
8秒前
9秒前
儒雅的蜜粉完成签到,获得积分10
9秒前
zz发布了新的文献求助10
9秒前
9秒前
10秒前
陈丞澄发布了新的文献求助10
10秒前
蓦然发布了新的文献求助10
13秒前
13秒前
YCG完成签到 ,获得积分10
14秒前
竹筏过海应助淡然天问采纳,获得30
14秒前
浮游应助淡然天问采纳,获得10
14秒前
领导范儿应助柔弱的冬天采纳,获得30
15秒前
落后翠柏发布了新的文献求助10
16秒前
不安的成协完成签到,获得积分10
17秒前
17秒前
18秒前
长情听南发布了新的文献求助10
19秒前
锦慜发布了新的文献求助10
19秒前
顾矜应助蓦然采纳,获得10
20秒前
可爱的函函应助panda采纳,获得10
20秒前
量子星尘发布了新的文献求助10
20秒前
李昕123发布了新的文献求助10
21秒前
21秒前
吧唧完成签到,获得积分10
22秒前
123456完成签到,获得积分10
23秒前
大模型应助wjy321采纳,获得10
23秒前
云漫山发布了新的文献求助10
23秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Binary Alloy Phase Diagrams, 2nd Edition 6000
Encyclopedia of Reproduction Third Edition 3000
Comprehensive Methanol Science Production, Applications, and Emerging Technologies 2000
化妆品原料学 1000
The Political Psychology of Citizens in Rising China 800
1st Edition Sports Rehabilitation and Training Multidisciplinary Perspectives By Richard Moss, Adam Gledhill 600
热门求助领域 (近24小时)
化学 材料科学 生物 医学 工程类 计算机科学 有机化学 物理 生物化学 纳米技术 复合材料 内科学 化学工程 人工智能 催化作用 遗传学 数学 基因 量子力学 物理化学
热门帖子
关注 科研通微信公众号,转发送积分 5637805
求助须知:如何正确求助?哪些是违规求助? 4744034
关于积分的说明 15000235
捐赠科研通 4795945
什么是DOI,文献DOI怎么找? 2562246
邀请新用户注册赠送积分活动 1521747
关于科研通互助平台的介绍 1481704