Host–guest binding selectivity of ethylated pillar[5]arene (EtP5A) towards octane, 1,7-octadiene, and 1,7-octadiyne: a computational investigation

化学 支柱 辛烷值 选择性 计算化学 立体化学
作者
Adel Krid,Lotfi Belkhiri,Hamza Allal,Aleksey E. Kuznetsov,Abdou Boucekkine
出处
期刊:Structural Chemistry [Springer Science+Business Media]
卷期号:34 (2): 625-638
标识
DOI:10.1007/s11224-022-02002-1
摘要

Host–guest binding selectivity of the perethylated pillar[5]arene (EtP5A) macrocycles with aliphatic modified hydrocarbons, i.e., octane, 1,7-octadiene, and 1,7-octadiyne as guests, has been investigated computationally employing molecular docking simulations. Density functional theory (DFT) investigations were also performed on these host–guest complexes using the dispersion-corrected approach BLYP-D3(BJ)/TZP/COSMO calculations as implemented in the ADF program and two dispersion-corrected density functionals, ωB97XD and B97D, along with the 6-311G* basis set, coupled with the PCM solvation model as implemented in the Gaussian software. We performed analysis of the frontier molecular orbitals (FMO) and natural bond orbitals (NBO), energy decomposition analysis (EDA), and noncovalent interaction (NCI-RDG) analysis. The study sheds light on the structures and binding energetics of EtP5A with the above-mentioned guests as well as on the physicochemical nature of the noncovalent interactions involved in these host–guest inclusion complexes. Based on the docking simulations, the EtP5A host revealed slightly better binding ability in the complex with the alkyne guest than with the octane and alkene, as corroborated by the EDA analysis. The results showed that the complexation of EtP5A with the hydrocarbons is mainly governed by the interplay of electrostatic interactions and dispersive noncovalent interactions. These results agree well with NCI-RDG and NBO analysis showing that host–guest binding interactions result predominantly from electrostatic C-H···π and van der Waals interactions, the H-bonding being weak or not observed. The results obtained using different computational methods were found to be in good agreement and complementary.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
鬼眼刀狂发布了新的文献求助10
刚刚
刚刚
Leach完成签到 ,获得积分10
1秒前
impulsive发布了新的文献求助20
1秒前
2秒前
John完成签到,获得积分10
2秒前
11111完成签到,获得积分10
2秒前
Lyue完成签到,获得积分10
2秒前
GGGGGG果果发布了新的文献求助10
2秒前
miaomiao应助汪哈七采纳,获得10
2秒前
Jenlisa完成签到 ,获得积分10
3秒前
慕青应助轩1采纳,获得10
3秒前
打打应助喜喜采纳,获得10
4秒前
4秒前
77发布了新的文献求助10
4秒前
4秒前
叉叉茶完成签到,获得积分10
5秒前
adkdad完成签到,获得积分10
5秒前
牛奶拌可乐完成签到 ,获得积分10
6秒前
wilson完成签到,获得积分10
7秒前
爆米花应助王小夏采纳,获得10
7秒前
7秒前
天天开心发布了新的文献求助10
8秒前
铅笔995完成签到,获得积分10
8秒前
8秒前
8秒前
9秒前
asdasdas发布了新的文献求助10
9秒前
WPP完成签到,获得积分10
10秒前
yyawkx完成签到,获得积分10
10秒前
紫z紫完成签到 ,获得积分10
10秒前
Hello应助想睡觉的猫采纳,获得10
11秒前
Garrett完成签到 ,获得积分10
11秒前
11秒前
dandan发布了新的文献求助10
12秒前
YH完成签到,获得积分20
13秒前
七月流火应助张昭蓉采纳,获得10
13秒前
13秒前
www发布了新的文献求助10
14秒前
bkagyin应助大卫戴采纳,获得10
14秒前
高分求助中
【提示信息,请勿应助】关于scihub 10000
A new approach to the extrapolation of accelerated life test data 1000
徐淮辽南地区新元古代叠层石及生物地层 500
Coking simulation aids on-stream time 450
康复物理因子治疗 400
北师大毕业论文 基于可调谐半导体激光吸收光谱技术泄漏气体检测系统的研究 390
Phylogenetic study of the order Polydesmida (Myriapoda: Diplopoda) 370
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 冶金 细胞生物学 免疫学
热门帖子
关注 科研通微信公众号,转发送积分 4016497
求助须知:如何正确求助?哪些是违规求助? 3556675
关于积分的说明 11322036
捐赠科研通 3289416
什么是DOI,文献DOI怎么找? 1812458
邀请新用户注册赠送积分活动 888053
科研通“疑难数据库(出版商)”最低求助积分说明 812060