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Luteipulveratus flavus sp. nov. isolated from two lichen species

生物 16S核糖体RNA 微生物学 系统发育树 基因组DNA 植物 细菌 基因 遗传学
作者
Lian-Shuang Xiong,Ming-Qun Fan,Zu-Zhen Yang,Shu-Ya Zuo,Qingxi Yuan,Li‐Song Wang,Cheng‐Lin Jiang,Xinyu Wang,Yi Jiang
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:74 (9)
标识
DOI:10.1099/ijsem.0.006518
摘要

Two novel strains, YIM 133132 T and YIM 133296, were isolated from lichen samples collected from Yunnan Province, Southwest PR China. YIM 133132 T and YIM 133296 are aerobic, Gram-staining-positive, non-motile actinomycetes. They are also catalase-positive and oxidase-negative, and YIM 133132 T formed flat yellowish colonies that were relatively dry on YIM38 agar medium. Flat yellowish colonies of YIM 133296 were also observed on YIM38 agar medium. YIM 133132 T grew at 25–35 °C (optimum 25–30 °C), pH 6.0–9.0 (optimum pH 7.0) and in the presence of 0–8% (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains YIM 133132 T and YIM 133296 represented members of the genus Luteipulveratus and exhibited high sequence similarity (96.93%) with Luteipulveratus halotolerans C296001 T . The genomic DNA G+C content of both strains was 71.8%. The DNA–DNA hybridisation (dDDH) values between YIM 133132 T and YIM 133296 were 85.1%, and the DNA–DNA hybridisation value between YIM 133132 T and YIM 133296 and L. halotolerans C296001 T was 23.4%. On the basis of the draft genome sequences, the average nucleotide identity (ANI) between strains YIM 133132 T and YIM 133296 and L. halotolerans C296001 T was 80.8%. The major menaquinones that were identified were MK-8(H 4 ), MK-9 and MK-8(H 2 ). The polar lipids were diphosphatidylglycerol and phosphatidylinositol. On the basis of the morphological, physiological, biochemical, genomic, phylogenetic and chemotaxonomic characteristics, strains YIM 133132 T and YIM 133296 can be clearly distinguished from L. halotolerans C296001 T , and the two strains represent a novel species for which the name L. flavus sp. nov. is proposed. The type strain is YIM 133132 T (CGMCC= 1.61357 T and KCTC= 49824 T ).

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