IBSI: an international community radiomics standardization initiative

工作流程 标杆管理 计算机科学 无线电技术 标准化 软件 图像处理 图像配准 医学 数据挖掘 医学物理学 图像(数学) 人工智能 数据库 营销 业务 程序设计语言 操作系统
作者
Mathieu Hatt,Martin Vallières,Dimitris Visvikis,Alex Zwanenburg
出处
期刊:The Journal of Nuclear Medicine [Society of Nuclear Medicine and Molecular Imaging]
卷期号:59: 287-287 被引量:55
摘要

287 Objectives: Radiomics is the high-throughput analysis of medical images for treatment individualization. It conventionally involves the quantification of different characteristics of a region of interest such as a tumor delineated in the image. These characteristics can be intensity measurements (such as mean SUV), volume, geometrical shape and textural features. The lack of standardisation of image features and the use of different software implementations limits the reproducibility of radiomics studies. It is thus a major hurdle for potential clinical translation of radiomics applications. To address this limitation, an international collaboration of 19 teams from 8 countries (Image Biomarkers Standardization Initiative, IBSI, see https://arxiv.org/abs/1612.07003) was initiated to i) establish a comprehensive radiomics workflow description, ii) provide verified definitions of commonly used features and iii) provide benchmarking of features extraction and image processing steps, as well as reporting guidelines. Material and Methods: Phase 1 of the initiative consisted in specifying and benchmarking across all participants more than 350 statistical, morphological and textural features (both in 2D or 3D) using a very simple digital phantom not requiring any image pre-processing steps. In phase 2, we added image pre-processing steps and features were benchmarked on 5 different configurations of a lung cancer patient CT image. Each configuration differed in the workflow of image processing steps, i.e. how the image stack is analyzed (2D: cases 1 and 2; 3D: 3 to 5), the interpolation method (none: 1; bi/trilinear: 2 to 4, tri-cubic: 5) and the grey-levels discretization approach (fixed bin size: 1 and 3; fixed number of bins: 2, 4 and 5). Both phases were iterative as the participants could compare their results with the other teams and update their workflow implementation accordingly. The most frequently contributed value of each feature was selected as its benchmark value. Agreement on a benchmark value was considered to exist if the value was produced by at least 50% of contributing teams (minimum 3), weighed by their overall accuracy in reproducing the benchmark values. Results: Twenty different software implementations across the 19 teams provided features values. In both phases, only a limited number of features were initially in agreement (phase 1: 12.3%, phase 2: 0.5 (0.0-1.4)%). The number of reliable features increased over time as problems were identified and solved, and agreement was achieved for most features (phase 1: 99.4%; phase 2: 96.4 (94.0-97.7)%). The remaining features for which no agreement could be reached were not commonly implemented. Conclusions: We addressed the lack of standardization in radiomics features definition, implementation and image pre-processing steps by providing a digital phantom and reliable benchmark values for most features. Exploiting this provided standard to validate radiomics software used in future studies is recommended to increase the reproducibility of such studies

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
善良雨泽发布了新的文献求助10
刚刚
JamesPei的应助被夏之守望采纳,获得10
刚刚
果筠蔚完成签到,获得积分10
刚刚
kk完成签到 ,获得积分10
1秒前
单纯绮烟发布了新的文献求助10
2秒前
2秒前
Jasper的应助被狂野的幻翠采纳,获得10
2秒前
2秒前
3秒前
Allen_Ng发布了新的文献求助10
3秒前
云野完成签到,获得积分10
4秒前
某某新完成签到,获得积分10
4秒前
5秒前
听风发布了新的文献求助10
5秒前
7秒前
7秒前
8秒前
9秒前
852的应助被MelonZ采纳,获得10
9秒前
溪夕er发布了新的文献求助10
10秒前
奈何发布了新的文献求助10
11秒前
luyuffff发布了新的文献求助10
11秒前
刚国忠完成签到,获得积分20
12秒前
郭伶伶完成签到 ,获得积分10
12秒前
小何发布了新的文献求助10
12秒前
爱科研的昭昭完成签到,获得积分10
13秒前
wangmouren发布了新的文献求助10
13秒前
赘婿的应助被kiko采纳,获得10
13秒前
13秒前
鱼遇发布了新的文献求助10
13秒前
15秒前
15秒前
15秒前
lyb关闭了lyb的文献求助
17秒前
21秒前
馨xin完成签到,获得积分10
21秒前
21秒前
21秒前
zxx完成签到,获得积分10
22秒前
111完成签到 ,获得积分10
22秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Energie-Contracting 1500
Représentation chimique de la structure des kérogènes et des asphaltènes en fonction de leur origine et de leur degré d'évolution 1000
Klimaschutzrecht durch den Energiesektor im Mehrebenensystem – Ein Rechtsvergleich 1000
Oncology Clinical Trials: Successful Design, Conduct, and Analysis, Second Edition 800
Ecotourism 400
Genera Orchidacearum Volume 4: Epidendroideae 300
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 计算机科学 工程类 有机化学 化学工程 生物化学 物理 复合材料 内科学 催化作用 光电子学 人工智能 细胞生物学 无机化学 物理化学 数学
热门帖子
关注 科研通微信公众号,转发送积分 8062958
求助须知:如何正确求助?哪些是违规求助? 9486574
关于积分的说明 21336296
捐赠科研通 7631214
什么是DOI,文献DOI怎么找? 3396752
关于科研通互助平台的介绍 2527107
邀请新用户注册赠送积分活动 2434777