Soil actinobacteria tend to have neutral interactions with other co‐occurring microorganisms, especially under oligotrophic conditions

放线菌门 生物 竞赛(生物学) 生态学 微生物 链霉菌 细菌 16S核糖体RNA 遗传学
作者
Bingfa Yan,Ning Liu,Minghao Liu,Xueyuan Du,Fei Shang,Ying Huang
出处
期刊:Environmental Microbiology [Wiley]
卷期号:23 (8): 4126-4140 被引量:34
标识
DOI:10.1111/1462-2920.15483
摘要

Summary Actinobacteria produce a variety of secondary metabolites that can influence the survival or behaviour of other organisms. The understanding of the ecological roles of actinobacteria has significantly improved in the past decades, but a systematic insight into the interactions between actinobacteria and other microbes in nature is warranted. Here, we studied the pairwise effects of actinobacteria on other microbes isolated from red soils under different nutritional conditions. We found that neutral effects dominated the interactions, accounting for 68.1% of the interactions in eutrophic conditions and for a significantly higher proportion (86.2%) in oligotrophic conditions. High nutrient levels boosted active metabolism of actinobacteria and generally made them more aggressive, supporting the stress gradient hypothesis. The secondary metabolites produced by actinobacteria played a pivotal role in interference competition with other microbes, of which the role of desferrioxamine siderophores could not be ignored. Niche overlap seemed to be another cause of competition, notably under oligotrophic conditions. Moreover, the large‐scale phylogeny had a much greater impact on the interaction than the location origin of the microbes. These results provide an understanding of the coexistence of actinobacteria with other microbes in nature and suggest neutrality as a key mechanism for maintaining microbial diversity in soils.
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