A Systematic Strategy for Screening and Application of Specific Biomarkers in Hepatotoxicity Using Metabolomics Combined With ROC Curves and SVMs

代谢组学 接收机工作特性 生物标志物 毒性 肝毒性 药理学 医学 内科学 生物标志物发现 生物信息学 生物 蛋白质组学 生物化学 基因
作者
Yubo Li,Lei Wang,Ju Liang,Haoyue Deng,Zhenzhu Zhang,Zhiguo Hou,Jiabin Xie,Yuming Wang,Yanjun Zhang
出处
期刊:Toxicological Sciences [Oxford University Press]
卷期号:150 (2): 390-399 被引量:30
标识
DOI:10.1093/toxsci/kfw001
摘要

Current studies that evaluate toxicity based on metabolomics have primarily focused on the screening of biomarkers while largely neglecting further verification and biomarker applications. For this reason, we used drug-induced hepatotoxicity as an example to establish a systematic strategy for screening specific biomarkers and applied these biomarkers to evaluate whether the drugs have potential hepatotoxicity toxicity. Carbon tetrachloride (5 ml/kg), acetaminophen (1500 mg/kg), and atorvastatin (5 mg/kg) are established as rat hepatotoxicity models. Fifteen common biomarkers were screened by multivariate statistical analysis and integration analysis-based metabolomics data. The receiver operating characteristic curve was used to evaluate the sensitivity and specificity of the biomarkers. We obtained 10 specific biomarker candidates with an area under the curve greater than 0.7. Then, a support vector machine model was established by extracting specific biomarker candidate data from the hepatotoxic drugs and nonhepatotoxic drugs; the accuracy of the model was 94.90% (92.86% sensitivity and 92.59% specificity) and the results demonstrated that those ten biomarkers are specific. 6 drugs were used to predict the hepatotoxicity by the support vector machines model; the prediction results were consistent with the biochemical and histopathological results, demonstrating that the model was reliable. Thus, this support vector machine model can be applied to discriminate the between the hepatic or nonhepatic toxicity of drugs. This approach not only presents a new strategy for screening-specific biomarkers with greater diagnostic significance but also provides a new evaluation pattern for hepatotoxicity, and it will be a highly useful tool in toxicity estimation and disease diagnoses.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
澡雪完成签到,获得积分10
刚刚
刚刚
小北完成签到,获得积分10
1秒前
CallMeIris发布了新的文献求助10
1秒前
1秒前
狂野半仙发布了新的文献求助10
1秒前
1秒前
白开水完成签到 ,获得积分10
4秒前
5秒前
6秒前
小牛发布了新的文献求助10
6秒前
标致咖啡发布了新的文献求助10
8秒前
123应助伤心猪大肠采纳,获得10
9秒前
李爱国应助西部小田采纳,获得10
9秒前
9秒前
科目三应助粗暴的世倌采纳,获得10
11秒前
贾先生完成签到,获得积分10
11秒前
lmy02关注了科研通微信公众号
12秒前
与落发布了新的文献求助10
12秒前
追梦完成签到,获得积分10
12秒前
胖虎发布了新的文献求助10
13秒前
14秒前
健忘菠萝完成签到 ,获得积分10
17秒前
张茜涵发布了新的文献求助30
17秒前
Dawn完成签到 ,获得积分10
18秒前
18秒前
19秒前
19秒前
19秒前
19秒前
21秒前
方既白发布了新的文献求助10
21秒前
Gaojie Yan应助zhangchi采纳,获得10
22秒前
22秒前
李健应助Dr.Yang采纳,获得10
23秒前
snack发布了新的文献求助50
23秒前
西部小田发布了新的文献求助10
24秒前
QQ发布了新的文献求助10
24秒前
25秒前
受伤11发布了新的文献求助10
26秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Reducing Compassion Fatigue, Secondary Traumatic Stress and Burnout 600
Comparative Elite Sport Development Systems, Structures and Public Policy 600
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
Auslegungsgeschichte 500
Cosmos as Art Object: Studies in Plato's Timaeus and Other Dialogues 500
What is the Future of Psychotherapy in Digital Age? Technology, AI Bots, and Psychotherapy after Covid 444
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7638018
求助须知:如何正确求助?哪些是违规求助? 9211365
关于积分的说明 19758586
捐赠科研通 7204977
什么是DOI,文献DOI怎么找? 3275778
关于科研通互助平台的介绍 2437385
邀请新用户注册赠送积分活动 2272936