A Systematic Strategy for Screening and Application of Specific Biomarkers in Hepatotoxicity Using Metabolomics Combined With ROC Curves and SVMs

代谢组学 接收机工作特性 生物标志物 毒性 肝毒性 药理学 医学 内科学 生物标志物发现 生物信息学 生物 蛋白质组学 生物化学 基因
作者
Yubo Li,Lei Wang,Ju Liang,Haoyue Deng,Zhenzhu Zhang,Zhiguo Hou,Jiabin Xie,Yuming Wang,Yanjun Zhang
出处
期刊:Toxicological Sciences [Oxford University Press]
卷期号:150 (2): 390-399 被引量:30
标识
DOI:10.1093/toxsci/kfw001
摘要

Current studies that evaluate toxicity based on metabolomics have primarily focused on the screening of biomarkers while largely neglecting further verification and biomarker applications. For this reason, we used drug-induced hepatotoxicity as an example to establish a systematic strategy for screening specific biomarkers and applied these biomarkers to evaluate whether the drugs have potential hepatotoxicity toxicity. Carbon tetrachloride (5 ml/kg), acetaminophen (1500 mg/kg), and atorvastatin (5 mg/kg) are established as rat hepatotoxicity models. Fifteen common biomarkers were screened by multivariate statistical analysis and integration analysis-based metabolomics data. The receiver operating characteristic curve was used to evaluate the sensitivity and specificity of the biomarkers. We obtained 10 specific biomarker candidates with an area under the curve greater than 0.7. Then, a support vector machine model was established by extracting specific biomarker candidate data from the hepatotoxic drugs and nonhepatotoxic drugs; the accuracy of the model was 94.90% (92.86% sensitivity and 92.59% specificity) and the results demonstrated that those ten biomarkers are specific. 6 drugs were used to predict the hepatotoxicity by the support vector machines model; the prediction results were consistent with the biochemical and histopathological results, demonstrating that the model was reliable. Thus, this support vector machine model can be applied to discriminate the between the hepatic or nonhepatic toxicity of drugs. This approach not only presents a new strategy for screening-specific biomarkers with greater diagnostic significance but also provides a new evaluation pattern for hepatotoxicity, and it will be a highly useful tool in toxicity estimation and disease diagnoses.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
科研通AI6.2应助非洲大象采纳,获得50
1秒前
2秒前
123完成签到,获得积分10
2秒前
4秒前
cc完成签到,获得积分10
4秒前
科研通AI6.2应助zzxc采纳,获得10
5秒前
lzr发布了新的文献求助10
6秒前
李丽丽完成签到 ,获得积分10
7秒前
wangcheng完成签到,获得积分10
7秒前
little2000完成签到 ,获得积分10
7秒前
30发布了新的文献求助10
7秒前
诚心的以寒完成签到,获得积分10
8秒前
Echo发布了新的文献求助20
8秒前
俏皮的孤丹完成签到 ,获得积分10
8秒前
王也完成签到,获得积分10
8秒前
小晴发布了新的文献求助30
9秒前
好叔叔发布了新的文献求助10
12秒前
13秒前
14秒前
16秒前
感性的又琴完成签到,获得积分10
17秒前
初景应助小晴采纳,获得20
17秒前
明亮紫易完成签到,获得积分10
20秒前
数羊到黎明完成签到 ,获得积分10
21秒前
忧虑的代容完成签到,获得积分10
21秒前
xiaoxi完成签到 ,获得积分10
21秒前
Qing完成签到,获得积分10
21秒前
Onepiece完成签到 ,获得积分10
22秒前
22秒前
souven完成签到,获得积分10
24秒前
社会主义接班人完成签到 ,获得积分10
25秒前
maozi发布了新的文献求助10
26秒前
科研通AI6.4应助追寻向雁采纳,获得10
26秒前
钱璐璐完成签到 ,获得积分10
29秒前
zyro发布了新的文献求助50
30秒前
万能图书馆应助威武静白采纳,获得10
30秒前
是猪毛啊完成签到,获得积分10
31秒前
32秒前
赵铁皮完成签到,获得积分10
32秒前
111111发布了新的文献求助10
32秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Principles of town planning: translating concepts to applications 1000
Navigating Normative Orders. Interdisciplinary Perspectives 800
1 Peter and Christ's Descent to the Dead in Its Early Christian Reception 700
Organizational Behavior 510
Management and the Arts 510
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7740693
求助须知:如何正确求助?哪些是违规求助? 9289281
关于积分的说明 20195025
捐赠科研通 7318891
什么是DOI,文献DOI怎么找? 3306508
关于科研通互助平台的介绍 2458788
邀请新用户注册赠送积分活动 2316746