A Systematic Strategy for Screening and Application of Specific Biomarkers in Hepatotoxicity Using Metabolomics Combined With ROC Curves and SVMs

代谢组学 接收机工作特性 生物标志物 毒性 肝毒性 药理学 医学 内科学 生物标志物发现 生物信息学 生物 蛋白质组学 生物化学 基因
作者
Yubo Li,Lei Wang,Ju Liang,Haoyue Deng,Zhenzhu Zhang,Zhiguo Hou,Jiabin Xie,Yuming Wang,Yanjun Zhang
出处
期刊:Toxicological Sciences [Oxford University Press]
卷期号:150 (2): 390-399 被引量:30
标识
DOI:10.1093/toxsci/kfw001
摘要

Current studies that evaluate toxicity based on metabolomics have primarily focused on the screening of biomarkers while largely neglecting further verification and biomarker applications. For this reason, we used drug-induced hepatotoxicity as an example to establish a systematic strategy for screening specific biomarkers and applied these biomarkers to evaluate whether the drugs have potential hepatotoxicity toxicity. Carbon tetrachloride (5 ml/kg), acetaminophen (1500 mg/kg), and atorvastatin (5 mg/kg) are established as rat hepatotoxicity models. Fifteen common biomarkers were screened by multivariate statistical analysis and integration analysis-based metabolomics data. The receiver operating characteristic curve was used to evaluate the sensitivity and specificity of the biomarkers. We obtained 10 specific biomarker candidates with an area under the curve greater than 0.7. Then, a support vector machine model was established by extracting specific biomarker candidate data from the hepatotoxic drugs and nonhepatotoxic drugs; the accuracy of the model was 94.90% (92.86% sensitivity and 92.59% specificity) and the results demonstrated that those ten biomarkers are specific. 6 drugs were used to predict the hepatotoxicity by the support vector machines model; the prediction results were consistent with the biochemical and histopathological results, demonstrating that the model was reliable. Thus, this support vector machine model can be applied to discriminate the between the hepatic or nonhepatic toxicity of drugs. This approach not only presents a new strategy for screening-specific biomarkers with greater diagnostic significance but also provides a new evaluation pattern for hepatotoxicity, and it will be a highly useful tool in toxicity estimation and disease diagnoses.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
田様应助科研通管家采纳,获得10
刚刚
Owen应助科研通管家采纳,获得10
刚刚
丘比特应助科研通管家采纳,获得10
刚刚
桐桐应助科研通管家采纳,获得10
刚刚
1秒前
清秀的沉鱼完成签到 ,获得积分10
1秒前
FSR发布了新的文献求助10
1秒前
大模型应助JKL采纳,获得10
3秒前
nini发布了新的文献求助10
3秒前
王丽杰发布了新的文献求助10
4秒前
fu完成签到,获得积分10
4秒前
6秒前
7秒前
小拟完成签到,获得积分20
9秒前
10秒前
娃哈哈完成签到,获得积分10
10秒前
丁丁完成签到 ,获得积分10
10秒前
文静犀牛发布了新的文献求助10
11秒前
小木子完成签到,获得积分20
11秒前
noflatterer完成签到,获得积分10
11秒前
jeff完成签到,获得积分10
12秒前
发飙的牛发布了新的文献求助10
12秒前
碧海青天完成签到,获得积分10
13秒前
14秒前
科研通AI6.4应助辰123采纳,获得10
14秒前
15秒前
西边的海完成签到,获得积分10
16秒前
16秒前
戴帽子的花盆完成签到,获得积分10
17秒前
暴躁秃头男孩完成签到,获得积分10
18秒前
齐欢完成签到,获得积分10
18秒前
情怀应助高高惮采纳,获得10
19秒前
自由的白开水完成签到,获得积分10
19秒前
21秒前
21秒前
21秒前
hj123完成签到,获得积分10
22秒前
两回事完成签到 ,获得积分10
24秒前
赏金猎人John_Wang完成签到,获得积分10
24秒前
杆杆完成签到 ,获得积分10
25秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Markov Chain Monte Carlo 5000
Evidence Summary. Injection (subcutaneous):op- timal administration 1000
悉尼大学博士学位论文,题目:Modelling and testing of one-sided stitched laminated composites. 作者:Kristopher P. Plain 700
Matrix Methods in Data Mining and Pattern Recognition Second Edition 610
Curating Socialism: A Handbook of International Art Exhibitions 1947-1989 530
Lengua e imagen en la comunicación digital 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7484938
求助须知:如何正确求助?哪些是违规求助? 9077247
关于积分的说明 19357426
捐赠科研通 7099731
什么是DOI,文献DOI怎么找? 3248185
关于科研通互助平台的介绍 2417456
邀请新用户注册赠送积分活动 2233611