Heavy metal ions in drinking water severely threaten public health in various places worldwide. Nanofiltration (NF) membrane technology is an attractive option for heavy metal ions removal; however, improving NF membrane filtration performance is required to make their industrial application viable. In this study, a positively charged THPC/PEI-TMC NF membrane was designed via simple one-step incorporation of Tetrakis (hydroxymethyl) phosphonium chloride (THPC) biocide on the surface of PEI-TMC membranes, significantly optimizing surface morphology, roughness, hydrophilicity, and zeta potential of PEI-TMC membranes. It was found that the pure water permeability (11.6 Lm-2h-1bar-1) of the THPC modified membrane was three times larger than that of the original PEI-TMC membrane (3.4 Lm-2h-1bar-1) while maintaining a high level of ion rejections (around 95% for Zn2+, Cd2+, Ni2+, Cu2+ and about 90% for Pb2+). Additionally, the incorporation of the THPC on the original PEI-TMC membrane surface also conferred good antibacterial properties, which protect the organic membrane from bacterial growth and prolong the lifespan of the membrane.