Abstract To develop ionic liquid/porous silicon (IL/pSi) microarrays we have contact pin‐printed 20 hydrophobic and hydrophilic ionic liquids onto as‐prepared, hydrogen‐passivated porous silicon (ap‐pSi) and then determined the individual IL spot size, shape and associated pSi surface chemistry. The results reveal that the hydrophobic ionic liquids oxidize the ap‐pSi slightly. In contrast, the hydrophilic ionic liquids lead to heavily oxidized pSi (i.e., ox‐pSi). The strong oxidation arises from residual water within the hydrophilic ILs that is delivered from these ILs into the ap‐pSi matrix causing oxidation. This phenomenon is less of an issue in the hydrophobic ILs because their water solubility is substantially lower.