Three Fe(III)-reducing and nitrogen-fixing bacteria, Anaeromyxobacter terrae sp. nov., Anaeromyxobacter oryzisoli sp. nov. and Anaeromyxobacter soli sp. nov., isolated from paddy soil

生物 16S核糖体RNA 系统发育树 细菌 植物 土壤微生物学 微生物学 基因 遗传学
作者
Rong Tang,Shang Yang,Manik Prabhu Narsing Rao,Cheng-Jie Xie,Shuang Han,Qiue Yang,Christopher Rensing,Guo‐Hong Liu,Yong Yuan,Shungui Zhou
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:74 (2) 被引量:2
标识
DOI:10.1099/ijsem.0.006268
摘要

Three microaerophilic bacterial strains, designated SG22 T , SG63 T and SG29 T were isolated from paddy soils in PR China. Cells of these strains were Gram-staining-negative and long rod-shaped. SG22 T , SG63 T and SG29 T showed the highest 16S rRNA gene sequence similarities with the members of the genus Anaeromyxobacter . The results of phylogenetic and phylogenomic analysis also indicated that these strains clustered with members of the genus Anaeromyxobacter . The main respiratory menaquinone of SG22 T , SG63 T and SG29 T was MK-8 and the major fatty acids were iso-C 15 : 0 , iso-C 17 : 0 and C 16 : 0 . SG22 T , SG29 T and SG63 T not only possessed iron reduction ability but also harboured genes ( nifHDK ) encoding nitrogenase. The genomic DNA G+C contents of SG22 T , SG63 T and SG29 T ranged from 73.3 to 73.5 %. The average nucleotide identity (ANI) and digital DNA–DNA hybridisation (dDDH) values between SG22 T , SG63 T and SG29 T and the closely related species of the genus Anaeromyxobacter were lower than the cut-off values (dDDH 70 % and ANI 95–96 %) for prokaryotic species delineation. On the basis of these results, strains SG22 T , SG63 T and SG29 T represent three novel species within the genus Anaeromyxobacter , for which the names Anaeromyxobacter terrae sp. nov., Anaeromyxobacter oryzisoli sp. nov. and Anaeromyxobacter soli sp. nov., are proposed. The type strains are SG22 T (= GDMCC 1.3185 T = JCM 35581 T ), SG63 T (= GDMCC 1.2914 T = JCM 35124 T ) and SG29 T (= GDMCC 1.2911 T = JCM 35123 T ).

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