C-C Motif Chemokine Ligand 5 (CCL5): A Potential Biomarker andImmunotherapy Target for Osteosarcoma

CCL5 小桶 接收机工作特性 趋化因子 计算生物学 骨肉瘤 基因 医学 基因本体论 生物 癌症研究 免疫系统 基因表达 免疫学 内科学 遗传学 T细胞 白细胞介素2受体
作者
Heng Zheng,Yichong Wang,Fengfeng Li
出处
期刊:Current Cancer Drug Targets [Bentham Science]
卷期号:24 (3): 308-318 被引量:1
标识
DOI:10.2174/1568009623666230815115755
摘要

Background: Osteosarcoma (OS) is the most common primary malignant tumor of bone tissue, which has an insidious onset and is difficult to detect early, and few early diagnostic markers with high specificity and sensitivity. Therefore, this study aims to identify potential biomarkers that can help diagnose OS in its early stages and improve the prognosis of patients. Methods: The data sets of GSE12789, GSE28424, GSE33382 and GSE36001 were combined and normalized to identify Differentially Expressed Genes (DEGs). The data were analyzed by Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genome (KEGG) and Disease Ontology (DO). The hub gene was selected based on the common DEG that was obtained by applying two regression methods: the Least Absolute Shrinkage and Selection Operator (LASSO) and Support vVector Machine (SVM). Then the diagnostic value of the hub gene was evaluated in the GSE42572 data set. Finally, the correlation between immunocyte infiltration and key genes was analyzed by CIBERSORT. Results: The regression analysis results of LASSO and SVM are the following three DEGs: FK501 binding protein 51 (FKBP5), C-C motif chemokine ligand 5 (CCL5), complement component 1 Q subcomponent B chain (C1QB). We evaluated the diagnostic performance of three biomarkers (FKBP5, CCL5 and C1QB) for osteosarcoma using receiver operating characteristic (ROC) analysis. In the training group, the area under the curve (AUC) of FKBP5, CCL5 and C1QB was 0.907, 0.874 and 0.676, respectively. In the validation group, the AUC of FKBP5, CCL5 and C1QB was 0.618, 0.932 and 0.895, respectively. It is noteworthy that these genes were more expressed in tumor tissues than in normal tissues by various immune cell types, such as plasma cells, CD8+ T cells, T regulatory cells (Tregs), activated NK cells, activated dendritic cells and activated mast cells. These immune cell types are also associated with the expression levels of the three diagnostic genes that we identified. Conclusion: We found that CCL5 can be considered an early diagnostic gene of osteosarcoma, and CCL5 interacts with immune cells to influence tumor occurrence and development. These findings have important implications for the early detection of osteosarcoma and the identification of novel therapeutic targets.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
甘乐完成签到 ,获得积分10
1秒前
科研通AI6应助rei402采纳,获得10
2秒前
孙博发布了新的文献求助10
3秒前
酶切完成签到,获得积分10
3秒前
3秒前
Owen应助血绣采纳,获得10
5秒前
7秒前
7秒前
Orange应助枕星采纳,获得10
7秒前
li完成签到,获得积分10
8秒前
CodeCraft应助积极擎汉采纳,获得10
8秒前
9秒前
费劲来到这的Rua完成签到,获得积分10
9秒前
曼珠沙华发布了新的文献求助10
10秒前
worrysyx完成签到,获得积分10
12秒前
huihui发布了新的文献求助10
12秒前
星辰大海应助sasa采纳,获得10
13秒前
15秒前
15秒前
16秒前
拉长的问晴完成签到,获得积分10
16秒前
科研通AI6应助坚果采纳,获得30
16秒前
王冠男完成签到,获得积分10
17秒前
17秒前
17秒前
banboo完成签到,获得积分10
19秒前
爆米花应助yyy采纳,获得10
20秒前
慕青应助qin采纳,获得10
21秒前
大个应助井哥儿采纳,获得10
21秒前
血绣发布了新的文献求助10
21秒前
闪闪秋寒完成签到 ,获得积分10
22秒前
LingYi完成签到,获得积分10
22秒前
郭琳完成签到,获得积分10
22秒前
lsc完成签到,获得积分10
23秒前
psc完成签到,获得积分10
24秒前
花成花完成签到,获得积分10
25秒前
25秒前
25秒前
SciGPT应助huihui采纳,获得10
25秒前
王冠男发布了新的文献求助30
25秒前
高分求助中
Clinical Microbiology Procedures Handbook, Multi-Volume, 5th Edition 临床微生物学程序手册,多卷,第5版 2000
List of 1,091 Public Pension Profiles by Region 1621
Les Mantodea de Guyane: Insecta, Polyneoptera [The Mantids of French Guiana] | NHBS Field Guides & Natural History 1500
The Victim–Offender Overlap During the Global Pandemic: A Comparative Study Across Western and Non-Western Countries 1000
Lloyd's Register of Shipping's Approach to the Control of Incidents of Brittle Fracture in Ship Structures 1000
Brittle fracture in welded ships 1000
King Tyrant 720
热门求助领域 (近24小时)
化学 材料科学 生物 医学 工程类 计算机科学 有机化学 物理 生物化学 纳米技术 复合材料 内科学 化学工程 人工智能 催化作用 遗传学 数学 基因 量子力学 物理化学
热门帖子
关注 科研通微信公众号,转发送积分 5588492
求助须知:如何正确求助?哪些是违规求助? 4671582
关于积分的说明 14787884
捐赠科研通 4625454
什么是DOI,文献DOI怎么找? 2531836
邀请新用户注册赠送积分活动 1500428
关于科研通互助平台的介绍 1468314