生物
异染色质
着丝粒
遗传学
重复序列
后转座子
构成性异染色质
分子生物学
散落重复
染色体
基因组
基因
转座因子
人类基因组
作者
Yoshinobu Uno,Kazumi Matsubara,Jun Inoue,Johji Inazawa,Akio Shinohara,Chihiro Koshimoto,Kenji Ichiyanagi,Yoichi Matsuda
摘要
Constitutive heterochromatin, consisting of repetitive sequences, diverges very rapidly; therefore, its nucleotide sequences and chromosomal distributions are often largely different, even between closely related species. The chromosome C-banding patterns of two Gerbillinae species, <i>Meriones unguiculatus</i> and <i>Gerbillus perpallidus</i>, vary greatly, even though they belong to the same subfamily. To understand the evolution of C-positive heterochromatin in these species, we isolated highly repetitive sequences, determined their nucleotide sequences, and characterized them using chromosomal and filter hybridization. We obtained a centromeric repeat (MUN-<i>Hae</i>III) and a chromosome 13-specific repeat (MUN-<i>Eco</i>RI) from <i>M. unguiculatus</i>. We also isolated a centromeric/pericentromeric repeat (GPE-MBD) and an interspersed-type repeat that was predominantly amplified in the X and Y chromosomes (GPE-<i>Eco</i>RI) from <i>G. perpallidus</i>. GPE-MBD was found to contain a 17-bp motif that is essential for binding to the centromere-associated protein CENP-B. This indicates that it may play a role in the formation of a specified structure and/or function of centromeres. The nucleotide sequences of the three sequence families, except GPE-<i>Eco</i>RI, were conserved only in Gerbillinae. GPE-<i>Eco</i>RI was derived from the long interspersed nuclear elements 1 retrotransposon and showed sequence homology throughout Muridae and Cricetidae species, indicating that the repeat sequence occurred at least in the common ancestor of Muridae and Cricetidae. Due to a lack of assembly data of highly repetitive sequences constituting heterochromatin in whole-genome sequences of vertebrate species published to date, the knowledge obtained in this study provides useful information for a deep understanding of the evolution of repetitive sequences in not only rodents but also in mammals.
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