Plasma Proteomes and Genome-Wide Association Data for Causal Protein Identification in Stroke

蛋白质组 全基因组关联研究 计算生物学 鉴定(生物学) 神经学 基因组 冲程(发动机) 遗传关联 生物 遗传学 生物信息学 医学 基因 单核苷酸多态性 神经科学 基因型 机械工程 工程类 植物
作者
Lisi Xu,Ruonan Zhang,Xiaolin Zhang,Bing Liu,Daifa Huang,Yanxia Liu,Xiuli Shang
出处
期刊:Molecular Neurobiology [Springer Science+Business Media]
被引量:1
标识
DOI:10.1007/s12035-024-04411-1
摘要

Plasma proteins are promising biomarkers and potential drug targets for stroke. This study aimed to explore whether there is a causal relationship between plasma proteins and subtypes of stroke using a Mendelian randomization (MR) approach. A two-sample bidirectional Mendelian randomization approach was employed to investigate the causal link between plasma proteins and stroke. Data on plasma proteins were obtained from three studies, including INTERVAL, and pooled stroke information was sourced from the MEGASTROKE consortium and the UK Biobank dataset, covering four subtypes of stroke. MR analyses were primarily conducted using inverse variance weighting, and sensitivity analyses were also performed. Finally, potential reverse causality was assessed using bidirectional MR. We identified two proteins causally associated with stroke: one as a potential therapeutic target and another as a protective factor. CXCL8 was found to be positively associated with the risk of developing large-artery atherosclerotic (LAA) stroke (OR, 1.005; 95% CI 1.001 to 1.010; p = 0.022), whereas TNFRSF11b was negatively correlated with the risk of developing LAA stroke (OR, 0.937; 95% CI 0.892 to 0.984; p = 0.010), independently of other stroke subtypes. Reverse bivariate analysis did not indicate that ischemic stroke was causally associated with CXCL8 and TNFRSF11b. There is a causal relationship between CXCL8 and TNFRSF11b with LAA stroke, independent of other subtypes. This study offers a new perspective on the genetics of stroke.

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