Development of an integrated predictive model for postoperative glioma-related epilepsy using gene-signature and clinical data

Lasso(编程语言) 逻辑回归 接收机工作特性 医学 癫痫 队列 胶质瘤 肿瘤科 内科学 计算机科学 癌症研究 精神科 万维网
作者
Lianwang Li,Chuanbao Zhang,Zheng Wang,Yinyan Wang,Yuhao Guo,Chong Qi,Gan You,Zhang Zhong,Xing Fan,Tao Jiang
出处
期刊:BMC Cancer [BioMed Central]
卷期号:23 (1) 被引量:2
标识
DOI:10.1186/s12885-022-10385-x
摘要

This study aimed to develop an integrated model for predicting the occurrence of postoperative seizures in patients with diffuse high-grade gliomas (DHGGs) using clinical and RNA-seq data.Patients with DHGGs, who received prophylactic anti-epileptic drugs (AEDs) for three months following surgery, were enrolled into the study. The patients were assigned randomly into training (n = 166) and validation (n = 42) cohorts. Differentially expressed genes (DEGs) were identified based on preoperative glioma-related epilepsy (GRE) history. Least absolute shrinkage and selection operator (LASSO) logistic regression analysis was used to construct a predictive gene-signature for the occurrence of postoperative seizures. The final integrated prediction model was generated using the gene-signature and clinical data. Receiver operating characteristic analysis and calibration curve method were used to evaluate the accuracy of the gene-signature and prediction model using the training and validation cohorts.A seven-gene signature for predicting the occurrence of postoperative seizures was developed using LASSO logistic regression analysis of 623 DEGs. The gene-signature showed satisfactory predictive capacity in the training cohort [area under the curve (AUC) = 0.842] and validation cohort (AUC = 0.751). The final integrated prediction model included age, temporal lobe involvement, preoperative GRE history, and gene-signature-derived risk score. The AUCs of the integrated prediction model were 0.878 and 0.845 for the training and validation cohorts, respectively.We developed an integrated prediction model for the occurrence of postoperative seizures in patients with DHGG using clinical and RNA-Seq data. The findings of this study may contribute to the development of personalized management strategies for patients with DHGGs and improve our understanding of the mechanisms underlying GRE in these patients.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
linfordlu完成签到,获得积分0
1秒前
www发布了新的文献求助10
2秒前
2711发布了新的文献求助10
3秒前
华仔应助俏皮的豌豆采纳,获得10
3秒前
波哥发布了新的文献求助10
4秒前
小丸子发布了新的文献求助10
5秒前
大头完成签到 ,获得积分10
6秒前
6秒前
李洁完成签到,获得积分10
8秒前
Rachel完成签到,获得积分10
8秒前
桐桐应助nihaoaaaa采纳,获得10
10秒前
11秒前
www完成签到,获得积分10
12秒前
勤劳的木木完成签到 ,获得积分10
13秒前
14秒前
Akim应助科研通管家采纳,获得10
14秒前
Ava应助科研通管家采纳,获得10
14秒前
14秒前
李爱国应助科研通管家采纳,获得10
14秒前
Anshan应助科研通管家采纳,获得10
15秒前
Akim应助科研通管家采纳,获得10
15秒前
朝与夕发布了新的文献求助10
15秒前
hhh__hhh完成签到,获得积分20
15秒前
研友_VZG7GZ应助科研通管家采纳,获得10
15秒前
华仔应助科研通管家采纳,获得10
15秒前
脑洞疼应助科研通管家采纳,获得10
15秒前
上官若男应助科研通管家采纳,获得30
15秒前
李爱国应助科研通管家采纳,获得10
15秒前
我是老大应助科研通管家采纳,获得10
15秒前
爆米花应助学术z采纳,获得10
15秒前
无花果应助科研通管家采纳,获得10
15秒前
啦啦啦应助科研通管家采纳,获得10
15秒前
斯文败类应助科研通管家采纳,获得30
16秒前
汉堡包应助科研通管家采纳,获得10
16秒前
NexusExplorer应助科研通管家采纳,获得10
16秒前
16秒前
16秒前
彭于晏应助科研通管家采纳,获得10
16秒前
Akim应助默默采纳,获得10
16秒前
yjh123应助科研通管家采纳,获得30
16秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Markov Chain Monte Carlo 5000
《上海道教》季刊 2200
Evidence Summary. Injection (subcutaneous):op- timal administration 1000
悉尼大学博士学位论文,题目:Modelling and testing of one-sided stitched laminated composites. 作者:Kristopher P. Plain 700
Matrix Methods in Data Mining and Pattern Recognition Second Edition 610
Curating Socialism: A Handbook of International Art Exhibitions 1947-1989 530
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7486986
求助须知:如何正确求助?哪些是违规求助? 9079097
关于积分的说明 19362607
捐赠科研通 7101298
什么是DOI,文献DOI怎么找? 3248460
关于科研通互助平台的介绍 2417798
邀请新用户注册赠送积分活动 2233884