Development of an integrated predictive model for postoperative glioma-related epilepsy using gene-signature and clinical data

Lasso(编程语言) 逻辑回归 接收机工作特性 医学 癫痫 队列 胶质瘤 肿瘤科 内科学 计算机科学 癌症研究 精神科 万维网
作者
Lianwang Li,Chuanbao Zhang,Zheng Wang,Yinyan Wang,Yuhao Guo,Chong Qi,Gan You,Zhang Zhong,Xing Fan,Tao Jiang
出处
期刊:BMC Cancer [BioMed Central]
卷期号:23 (1) 被引量:2
标识
DOI:10.1186/s12885-022-10385-x
摘要

This study aimed to develop an integrated model for predicting the occurrence of postoperative seizures in patients with diffuse high-grade gliomas (DHGGs) using clinical and RNA-seq data.Patients with DHGGs, who received prophylactic anti-epileptic drugs (AEDs) for three months following surgery, were enrolled into the study. The patients were assigned randomly into training (n = 166) and validation (n = 42) cohorts. Differentially expressed genes (DEGs) were identified based on preoperative glioma-related epilepsy (GRE) history. Least absolute shrinkage and selection operator (LASSO) logistic regression analysis was used to construct a predictive gene-signature for the occurrence of postoperative seizures. The final integrated prediction model was generated using the gene-signature and clinical data. Receiver operating characteristic analysis and calibration curve method were used to evaluate the accuracy of the gene-signature and prediction model using the training and validation cohorts.A seven-gene signature for predicting the occurrence of postoperative seizures was developed using LASSO logistic regression analysis of 623 DEGs. The gene-signature showed satisfactory predictive capacity in the training cohort [area under the curve (AUC) = 0.842] and validation cohort (AUC = 0.751). The final integrated prediction model included age, temporal lobe involvement, preoperative GRE history, and gene-signature-derived risk score. The AUCs of the integrated prediction model were 0.878 and 0.845 for the training and validation cohorts, respectively.We developed an integrated prediction model for the occurrence of postoperative seizures in patients with DHGG using clinical and RNA-Seq data. The findings of this study may contribute to the development of personalized management strategies for patients with DHGGs and improve our understanding of the mechanisms underlying GRE in these patients.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
小蘑菇的应助被三颗星南极三采纳,获得10
刚刚
刚刚
l0000完成签到,获得积分10
1秒前
nannan完成签到,获得积分10
1秒前
陶军辉发布了新的文献求助10
2秒前
4秒前
NexusExplorer的应助被bai采纳,获得10
5秒前
changaipei完成签到,获得积分10
6秒前
9秒前
dianeil发布了新的文献求助10
10秒前
悉达多完成签到,获得积分10
10秒前
13秒前
华仔的应助被海聪天宇采纳,获得10
13秒前
FashionBoy的应助被悉达多采纳,获得10
13秒前
悦耳依云发布了新的文献求助10
15秒前
17秒前
17秒前
qq发布了新的文献求助10
18秒前
19秒前
无极微光的应助被cong1216采纳,获得20
20秒前
勤恳的水风完成签到 ,获得积分10
20秒前
23秒前
干昕慈完成签到 ,获得积分10
24秒前
DeepSleep完成签到,获得积分10
25秒前
25秒前
生动的保温杯完成签到,获得积分10
25秒前
搜集达人的应助被想发论文采纳,获得10
26秒前
27秒前
芽儿完成签到,获得积分10
27秒前
夏初完成签到,获得积分10
28秒前
爆米花的应助被qq采纳,获得10
29秒前
29秒前
彭于晏的应助被赵楠采纳,获得10
30秒前
啦啦啦啦完成签到,获得积分10
30秒前
33秒前
崔世强发布了新的文献求助10
33秒前
34秒前
35秒前
隐形曼青的应助被悦耳依云采纳,获得10
35秒前
lsong完成签到,获得积分10
37秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Rosenblum, Global Change Biology 800
自動車の空力技術 800
Biographisches Lexikon der hervorragenden Ärzte der letzten fünfzig Jahre [1880–1930]. Zugleich Fortsetzung des Biographischen Lexikons der hervorragenden Ärzte aller Zeiten und Völker 600
Organizational Behavior 510
Management and the Arts 510
Issues in Task-Based Language Teaching 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 计算机科学 化学工程 工程类 有机化学 物理 复合材料 生物化学 内科学 细胞生物学 基因 遗传学 免疫学 冶金 光电子学 癌症研究
热门帖子
关注 科研通微信公众号,转发送积分 7787129
求助须知:如何正确求助?哪些是违规求助? 9325733
关于积分的说明 20406960
捐赠科研通 7376102
什么是DOI,文献DOI怎么找? 3322063
关于科研通互助平台的介绍 2469842
邀请新用户注册赠送积分活动 2338651