Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system

浮游细菌 溶解有机碳 生物 远洋带 碳循环 微生物种群生物学 陆源沉积物 环境化学 有机质 海洋噬菌体 生态学 微生物生态学 横断面 玫瑰杆菌 浮游生物 营养物 生态系统 浮游植物 细菌 系统发育学 化学 基因 古生物学 生物化学 遗传学 克莱德 沉积岩
作者
Helena Osterholz,Gabriel Singer,Bernd Wemheuer,Rolf Daniel,Meinhard Simon,Jutta Niggemann,Thorsten Dittmar
出处
期刊:The ISME Journal [Springer Nature]
卷期号:10 (7): 1717-1730 被引量:149
标识
DOI:10.1038/ismej.2015.231
摘要

Dissolved organic matter (DOM) is the main substrate and energy source for heterotrophic bacterioplankton. To understand the interactions between DOM and the bacterial community (BC), it is important to identify the key factors on both sides in detail, chemically distinct moieties in DOM and the various bacterial taxa. Next-generation sequencing facilitates the classification of millions of reads of environmental DNA and RNA amplicons and ultrahigh-resolution mass spectrometry yields up to 10 000 DOM molecular formulae in a marine water sample. Linking this detailed biological and chemical information is a crucial first step toward a mechanistic understanding of the role of microorganisms in the marine carbon cycle. In this study, we interpreted the complex microbiological and molecular information via a novel combination of multivariate statistics. We were able to reveal distinct relationships between the key factors of organic matter cycling along a latitudinal transect across the North Sea. Total BC and DOM composition were mainly driven by mixing of distinct water masses and presumably retain their respective terrigenous imprint on similar timescales on their way through the North Sea. The active microbial community, however, was rather influenced by local events and correlated with specific DOM molecular formulae indicative of compounds that are easily degradable. These trends were most pronounced on the highest resolved level, that is, operationally defined 'species', reflecting the functional diversity of microorganisms at high taxonomic resolution.

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