Development of a novel prognostic signature for colorectal cancer based on angiogenesis-related genes

血管生成 结直肠癌 签名(拓扑) 基因签名 癌症 肿瘤科 基因 医学 癌症研究 内科学 计算生物学 生物 生物信息学 遗传学 基因表达 几何学 数学
作者
Aiqin Chen,Kailai Wang,Lina Qi,Wangxiong Hu,Biting Zhou
出处
期刊:Heliyon [Elsevier BV]
卷期号:: e33662-e33662
标识
DOI:10.1016/j.heliyon.2024.e33662
摘要

BackgroundColorectal cancer (CRC) is the third most common malignant tumor worldwide. Angiogenesis is closely related to tumor metastasis, which is the main cause of cancer death. Although several angiogenesis signatures have been proposed in some cancer types, no angiogenic signature has been developed to predict the prognosis and efficacy of antiangiogenic bevacizumab in CRC patients.MethodsWe developed a novel CRC angiogenic signature by refining seven publicly available angiogenic gene sets using least absolute shrinkage and selection operator (LASSO). Immune and stromal cells within the tumor microenvironment were compared between the high- and low-risk groups in more than 1,000 CRC samples classified by calculating the risk score based on the customized angiogenic signature. The correlation of this new gene set with the efficacy of bevacizumab was also compared.ResultsA new prognostic-associated angiogenesis signature gene set was constructed that can divide CRC patients into two high- and low-risk groups. The high-risk angiogenic group was significantly associated with extracellular matrix organization, epithelial-mesenchymal transition (EMT), and myogenesis. In addition, the high-risk group had higher infiltration of stromal and immune cells and was more resistant to bevacizumab than the low-risk groupConclusionBriefly, we constructed a novel angiogenic signature that can predict the prognosis of CRC patients and the efficacy of bevacizumab in treating CRC. Our results provide new insights into the relationships among angiogenesis, metastasis, and medication for CRC.

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