已入深夜,您辛苦了!由于当前在线用户较少,发布求助请尽量完整的填写文献信息,科研通机器人24小时在线,伴您度过漫漫科研夜!祝你早点完成任务,早点休息,好梦!

A Prognostic Model Based on Cisplatin-Resistance Related Genes in Oral Squamous Cell Carcinoma.

顺铂 医学 列线图 肿瘤科 比例危险模型 免疫系统 基因 内科学 癌症研究 生存分析 免疫学 生物 化疗 遗传学
作者
Rong Liu,Qin Yang,Siyu Liu,Liang Sun
出处
期刊:PubMed 卷期号:22 (1): 39-50
标识
DOI:10.3290/j.ohpd.b4836127
摘要

To screen for the cisplatin resistance-related prognostic signature in oral squamous cell carcinoma (OSCC) and assess its correlation with the immune microenvironment.The gene expression data associated with OSCC and cisplatin-resistance were downloaded from TCGA and GEO databases. Cisplatin-resistant genes were selected through taking the intersection of differentially expressed genes (DEGs) between tumor and control groups as well as between cisplatin-resistant samples and parental samples. Then, prognosis-related cisplatin-resistant genes were further selected by univariate Cox regression and LASSO regression analyses to construct a survival prognosis model. A GSEA (gene set enrichment analysis) between two risk groups was conducted with the MSigDB v7.1 database. Finally, the immune landscape of the sample was studied using CIBERSORT. The IC50 values of 57 drugs were predicted using pRRophetic 0.5.A total 230 candidate genes were obtained. Then 7 drug-resistant genes were selected for prognostic risk-score (RS) signature construction using LASSO regression analysis, including STC2, TBC1D2, ADM, NDRG1, OLR1, PDGFA and ANO1. RS was an independent prognostic factor. Additionally, a nomogram model was established to predict the 1-, 2-, and 3-year survival rates of samples. The GSEA identified several differential pathways between two risk groups, such as EMT, hypoxia, and oxidative phosphorylation. Fifteen immune cells were statistically significantly different in infiltration level between the two groups, such as macrophages M2, and resting NK cells. A total of 57 drugs had statistically significantly different IC50 values between two risk groups.These model genes and immune cells may play a role in predicting the prognosis and chemoresistance in OSCC.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
Venus完成签到,获得积分10
2秒前
侧耳发布了新的文献求助10
2秒前
2秒前
大模型应助美丽的小姐姐采纳,获得10
3秒前
rsaorestoaerstn完成签到,获得积分10
5秒前
是是是发布了新的文献求助10
5秒前
是是是完成签到,获得积分10
10秒前
10秒前
11秒前
uikymh完成签到 ,获得积分0
14秒前
15秒前
满意人英发布了新的文献求助10
15秒前
arosetnaorestn完成签到,获得积分10
16秒前
泡泡鱼完成签到 ,获得积分10
16秒前
xiongyh10完成签到,获得积分10
16秒前
ziyue发布了新的文献求助10
17秒前
孤独的采珊完成签到 ,获得积分10
17秒前
高兴寒梦完成签到 ,获得积分10
17秒前
科研通AI2S应助侧耳采纳,获得10
18秒前
18秒前
Charles完成签到 ,获得积分10
20秒前
25秒前
29秒前
32秒前
小马甲应助酷酷绣采纳,获得10
32秒前
ZHAOyifan完成签到,获得积分10
35秒前
36秒前
真的不会完成签到,获得积分10
37秒前
雨的前世发布了新的文献求助10
37秒前
morena应助ZHAOyifan采纳,获得10
39秒前
脚踏实地呢完成签到 ,获得积分10
40秒前
林林林完成签到,获得积分10
40秒前
asss发布了新的文献求助30
41秒前
满意人英完成签到,获得积分10
42秒前
吴筮发布了新的文献求助10
42秒前
43秒前
英俊的铭应助sherrinford采纳,获得10
43秒前
耍酷鼠标完成签到 ,获得积分0
44秒前
ziyue完成签到,获得积分10
44秒前
45秒前
高分求助中
Tracking and Data Fusion: A Handbook of Algorithms 1000
Models of Teaching(The 10th Edition,第10版!)《教学模式》(第10版!) 800
La décision juridictionnelle 800
Rechtsphilosophie und Rechtstheorie 800
Nonlocal Integral Equation Continuum Models: Nonstandard Symmetric Interaction Neighborhoods and Finite Element Discretizations 600
Academic entitlement: Adapting the equity preference questionnaire for a university setting 500
Pervasive Management of Project-Based Learning: Teachers as Guides and Facilitators 400
热门求助领域 (近24小时)
化学 医学 材料科学 生物 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 基因 遗传学 物理化学 催化作用 免疫学 细胞生物学 电极
热门帖子
关注 科研通微信公众号,转发送积分 2876732
求助须知:如何正确求助?哪些是违规求助? 2488339
关于积分的说明 6737430
捐赠科研通 2171170
什么是DOI,文献DOI怎么找? 1153456
版权声明 585924
科研通“疑难数据库(出版商)”最低求助积分说明 566364