Selection and application of ssDNA aptamers against spermine based on Capture-SELEX

适体 指数富集配体系统进化 精胺 化学 选择(遗传算法) 分子生物学 生物化学 核糖核酸 生物 基因 人工智能 计算机科学
作者
Hui‐Li Tian,Nuo Duan,Shijia Wu,Zhouping Wang
出处
期刊:Analytica Chimica Acta [Elsevier]
卷期号:1081: 168-175 被引量:46
标识
DOI:10.1016/j.aca.2019.07.031
摘要

Spermine contamination ranks as one of the food safety issues, it will cause some adverse reactions if the intake of spermine is excessive in human body. So it is of great significance to establish fast and efficient analysis method to detect spermine in foods. In this study, the spermine aptamers with high affinity and specificity were obtained by the capture systematic evolution of ligands by exponential enrichment (Capture-SELEX) technique. Forty-one aptamer sequences were obtained by cloning and sequencing, and were divided into eight families based on homology and secondary structure analysis. The affinity and specificity of candidate aptamers was analyzed by isothermal titration calorimetry (ITC) and fluorescence assay. The aptamers named APJ-6 was picked out as the optimal aptamer that recognizes spermine specifically with the Kd value of 9.648 ± 0.896 nM. In order to verify the practicability of the selected aptamers, the sensitive aptamer-based fluorescene assay was designed. Under optimized conditions, this aptasensor exhibited a low detection limit of 0.052 nM, as well as a linear within the range of 0.1-20 nM. Besides, it has been further applied for the determination of spermine in pork samples and the recoveries ranged from 86.45% to 98.15%, showing its great potential for sensitive analysis in food safety control.
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