Genome-wide association analysis of diverticular disease points towards neuromuscular, connective tissue and epithelial pathomechanisms

憩室病 全基因组关联研究 憩室病 憩室炎 医学 遗传关联 内科学 穿孔 人口 病例对照研究 胃肠病学 荟萃分析 单核苷酸多态性 生物信息学 病理 生物 遗传学 基因型 基因 冶金 材料科学 环境卫生 冲孔
作者
Clemens Schafmayer,James Harrison,Stephan Buch,Christina Lange,Matthias Reichert,Philipp Hofer,François Cossais,Juozas Kupčinskas,Witigo von Schönfels,Bodo Schniewind,Wolfgang Kruis,Jürgen Tepel,Myrko Zobel,Jonas Rosendahl,Thorsten Jacobi,Andreas Walther-Berends,M. Schroeder,Ilka Vogel,Petr Sergeev,Hans Boedeker,Holger Hinrichsen,Andreas Volk,Jens-Uwe Erk,Greta Burmeister,Alexander Hendricks,Sebastian Hinz,Sebastian Wolff,Martina Böttner,Andrew R. Wood,Jessica Tyrrell,Robin N. Beaumont,Melanie Langheinrich,Torsten Kucharzik,Stefanie Brezina,Ursula Huber-Schönauer,Leonora Pietsch,Laura Sophie Noack,Mario Brosch,Alexander Herrmann,Raghavan Veera Thangapandi,Hans Wolfgang Schimming,Sebastian Zeißig,Stefan Palm,Gerd Focke,Anna Andréasson,Peter T. Schmidt,Juergen Weitz,Michael Krawczak,Henry Völzke,Gernot Leeb,Patrick Michl,Wolfgang Lieb,Robert Grützmann,André Franke,Frank Lammert,Thomas Becker,Limas Kupčinskas,Mauro D’Amato,Thilo Wedel,Christian Datz,Andrea Gsur,Michael N. Weedon,Jochen Hampe
出处
期刊:Gut [BMJ]
卷期号:68 (5): 854-865 被引量:96
标识
DOI:10.1136/gutjnl-2018-317619
摘要

Objective Diverticular disease is a common complex disorder characterised by mucosal outpouchings of the colonic wall that manifests through complications such as diverticulitis, perforation and bleeding. We report the to date largest genome-wide association study (GWAS) to identify genetic risk factors for diverticular disease. Design Discovery GWAS analysis was performed on UK Biobank imputed genotypes using 31 964 cases and 419 135 controls of European descent. Associations were replicated in a European sample of 3893 cases and 2829 diverticula-free controls and evaluated for risk contribution to diverticulitis and uncomplicated diverticulosis. Transcripts at top 20 replicating loci were analysed by real-time quatitative PCR in preparations of the mucosal, submucosal and muscular layer of colon. The localisation of expressed protein at selected loci was investigated by immunohistochemistry. Results We discovered 48 risk loci, of which 12 are novel, with genome-wide significance and consistent OR in the replication sample. Nominal replication (p<0.05) was observed for 27 loci, and additional 8 in meta-analysis with a population-based cohort. The most significant novel risk variant rs9960286 is located near CTAGE1 with a p value of 2.3×10 −10 and 0.002 (OR allelic =1.14 (95% CI 1.05 to 1.24)) in the replication analysis. Four loci showed stronger effects for diverticulitis, PHGR1 (OR 1.32, 95% CI 1.12 to 1.56), FAM155A-2 (OR 1.21, 95% CI 1.04 to 1.42), CALCB (OR 1.17, 95% CI 1.03 to 1.33) and S100A10 (OR 1.17, 95% CI 1.03 to 1.33). Conclusion In silico analyses point to diverticulosis primarily as a disorder of intestinal neuromuscular function and of impaired connective fibre support, while an additional diverticulitis risk might be conferred by epithelial dysfunction.

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