Evaluation of Primary Angle-Closure Glaucoma Susceptibility Loci for Estimating Angle Closure Disease Severity

医学 优势比 单核苷酸多态性 全基因组关联研究 青光眼 内科学 SNP公司 逻辑回归 病例对照研究 基因分型 眼科 遗传学 基因型 生物 基因
作者
Chang Liu,Monisha E. Nongpiur,Ching‐Yu Cheng,Chiea Chuen Khor,Marco Yu,Rahat Husain,Ching Lin Ho,Tina Wong,Pui Yi Boey,Shamira Perera,Tien Yin Wong,Eranga N. Vithana,Tin Aung
出处
期刊:Ophthalmology [Elsevier]
卷期号:128 (3): 403-409 被引量:12
标识
DOI:10.1016/j.ophtha.2020.07.027
摘要

PurposeTo investigate whether recently identified genetic loci for primary angle-closure glaucoma (PACG) are associated with disease severity.DesignCase-control study.ParticipantsEight hundred four PACG patients and 943 control participants of Chinese ethnicity from Singapore.MethodsThe 8 PACG-associated single nucleotide polymorphisms (SNPs; rs11024102 at PLEKHA7, rs3753841 at COL11A1, rs1015213 located between PCMTD1 and ST18 on chromosome 8q, rs3816415 at EPDR1, rs1258267 at CHAT, rs736893 at GLIS3, rs7494379 at FERMT2, and rs3739821 mapping in between DPM2 and FAM102A) identified from genome-wide association studies were tested for association with disease severity using logistic regression adjusted for age and gender. A P value of 0.006 was set as significant after Bonferroni correction for testing of 8 loci. We also calculated the weighted genetic risk score (GRS) weighted by the estimated individual SNP effect size on PACG calculated as logarithm of the odds ratio (OR). Disease severity was based on the visual field mean deviation (MD) and classified as early to moderate (MD, >–12 dB) and severe (MD, <–20 dB).Main Outcome MeasuresAssociation of PACG loci with severe disease.ResultsOf the 804 PACG patients, genotyping data were available for 768 individuals and included 436 with mild-to-moderate PACG and 206 with severe PACG. The PACG patients were significantly older (mean age, 64.3 ± 9.1 years vs. 56.4 ± 8.9 years; P < 0.001) and there were proportionately more women compared with control participants (58.4% vs. 49.0%; P < 0.001). Of the 8 loci investigated, we observed significant evidence of association with severe PACG at 1 SNP, namely rs3816415 in EPDR1 (OR, 2.03; 95% confidence interval [CI], 1.49–2.78; P = 1 × 10–5). A higher-weighted GRS was associated significantly with severe PACG, with an OR of 3.11 (95% CI, 1.95–4.96) comparing the lowest quartile with the highest quartile.ConclusionsOur results show that EPDR1 is associated significantly with severe PACG, suggesting that it may predispose patients to more aggressive disease development. Individuals with PACG with a higher GRS were associated with a higher risk of severe PACG. To investigate whether recently identified genetic loci for primary angle-closure glaucoma (PACG) are associated with disease severity. Case-control study. Eight hundred four PACG patients and 943 control participants of Chinese ethnicity from Singapore. The 8 PACG-associated single nucleotide polymorphisms (SNPs; rs11024102 at PLEKHA7, rs3753841 at COL11A1, rs1015213 located between PCMTD1 and ST18 on chromosome 8q, rs3816415 at EPDR1, rs1258267 at CHAT, rs736893 at GLIS3, rs7494379 at FERMT2, and rs3739821 mapping in between DPM2 and FAM102A) identified from genome-wide association studies were tested for association with disease severity using logistic regression adjusted for age and gender. A P value of 0.006 was set as significant after Bonferroni correction for testing of 8 loci. We also calculated the weighted genetic risk score (GRS) weighted by the estimated individual SNP effect size on PACG calculated as logarithm of the odds ratio (OR). Disease severity was based on the visual field mean deviation (MD) and classified as early to moderate (MD, >–12 dB) and severe (MD, <–20 dB). Association of PACG loci with severe disease. Of the 804 PACG patients, genotyping data were available for 768 individuals and included 436 with mild-to-moderate PACG and 206 with severe PACG. The PACG patients were significantly older (mean age, 64.3 ± 9.1 years vs. 56.4 ± 8.9 years; P < 0.001) and there were proportionately more women compared with control participants (58.4% vs. 49.0%; P < 0.001). Of the 8 loci investigated, we observed significant evidence of association with severe PACG at 1 SNP, namely rs3816415 in EPDR1 (OR, 2.03; 95% confidence interval [CI], 1.49–2.78; P = 1 × 10–5). A higher-weighted GRS was associated significantly with severe PACG, with an OR of 3.11 (95% CI, 1.95–4.96) comparing the lowest quartile with the highest quartile. Our results show that EPDR1 is associated significantly with severe PACG, suggesting that it may predispose patients to more aggressive disease development. Individuals with PACG with a higher GRS were associated with a higher risk of severe PACG.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
chenying完成签到 ,获得积分0
1秒前
韩医生口腔完成签到 ,获得积分10
4秒前
竹桃完成签到 ,获得积分10
9秒前
游大达完成签到 ,获得积分10
10秒前
达蒙璃完成签到 ,获得积分10
13秒前
14秒前
sy发布了新的文献求助10
21秒前
哈哈哈哈完成签到 ,获得积分10
24秒前
HCKACECE完成签到 ,获得积分10
25秒前
张小咩咩完成签到 ,获得积分10
33秒前
alexlpb完成签到,获得积分10
41秒前
旺仔完成签到 ,获得积分10
45秒前
跳跃仙人掌完成签到 ,获得积分10
47秒前
qianxi完成签到 ,获得积分10
55秒前
onevip完成签到,获得积分10
55秒前
Solar energy完成签到,获得积分10
1分钟前
火星上友易完成签到,获得积分10
1分钟前
pp1230完成签到,获得积分10
1分钟前
粗心的蜡烛完成签到 ,获得积分10
1分钟前
多边形完成签到 ,获得积分10
1分钟前
1分钟前
yw完成签到 ,获得积分10
1分钟前
黑糖珍珠完成签到 ,获得积分10
1分钟前
刘佳佳完成签到 ,获得积分10
1分钟前
ljb完成签到 ,获得积分10
1分钟前
舒心的青槐完成签到 ,获得积分10
1分钟前
感性的神级完成签到,获得积分10
2分钟前
风秋杨完成签到 ,获得积分10
2分钟前
困困困完成签到 ,获得积分10
2分钟前
Yolenders完成签到 ,获得积分10
2分钟前
2分钟前
个性松完成签到 ,获得积分10
2分钟前
racill完成签到 ,获得积分10
2分钟前
上善若水呦完成签到 ,获得积分10
2分钟前
JaneChen完成签到 ,获得积分10
2分钟前
文龙完成签到 ,获得积分10
3分钟前
Rebeccaiscute完成签到 ,获得积分10
3分钟前
celia完成签到 ,获得积分10
3分钟前
Jeffery426完成签到,获得积分10
3分钟前
NEVERLAND1958完成签到 ,获得积分10
3分钟前
高分求助中
rhetoric, logic and argumentation: a guide to student writers 1000
QMS18Ed2 | process management. 2nd ed 1000
Eric Dunning and the Sociology of Sport 850
Operative Techniques in Pediatric Orthopaedic Surgery 510
人工地层冻结稳态温度场边界分离方法及新解答 500
The Making of Détente: Eastern Europe and Western Europe in the Cold War, 1965-75 500
The history of Kenya agriculture 500
热门求助领域 (近24小时)
化学 医学 材料科学 生物 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 基因 遗传学 物理化学 催化作用 免疫学 细胞生物学 电极
热门帖子
关注 科研通微信公众号,转发送积分 2919248
求助须知:如何正确求助?哪些是违规求助? 2560989
关于积分的说明 6926832
捐赠科研通 2219448
什么是DOI,文献DOI怎么找? 1179849
版权声明 588619
科研通“疑难数据库(出版商)”最低求助积分说明 577316