结合位点
受体-配体动力学
表位
糖蛋白
突变体
化学
V3环
病毒进入
抗体
血浆蛋白结合
亲缘关系
病毒包膜
结合亲和力
动力学
生物物理学
病毒
受体
病毒学
生物
病毒复制
立体化学
生物化学
遗传学
基因
物理
量子力学
作者
Wentao Zhang,Alexis P. Godillot,Richard T. Wyatt,Joseph Sodroski,Irwin Chaiken
出处
期刊:Biochemistry
[American Chemical Society]
日期:2001-01-19
卷期号:40 (6): 1662-1670
被引量:51
摘要
HIV-1 utilizes CD4 and the chemokine coreceptor for viral entry. The coreceptor CCR5 binding site on gp120 partially overlaps with the binding epitope of 17b, a neutralizing antibody of HIV-1. We designed a multicomponent biosensor assay to investigate the kinetic mechanism of interaction between gp120 and its receptors and the cooperative effect of the CCR5 binding site on the CD4 binding site, using 17b as a surrogate of CCR5. The Env gp120 proteins from four viral strains (JRFL, YU2, 89.6, and HXB2) and their corresponding C1-, V1/V2-, C5-deleted mutants (ΔJRFL, ΔYU2, Δ89.6, and ΔHXB2) were tested in this study. We found that, across the primary and lab-adapted virus strains, 17b reduced the affinity of all four full-length Env gp120s for sCD4 by decreasing the on-rate and increasing the off-rate. This effect of 17b on full-length gp120 binding to sCD4 contrasts with the enhancing effect of sCD4 on gp120−17b interaction. For the corresponding loop-deleted mutants of Env gp120, the off-rates of the gp120−sCD4 interaction were greatly reduced in the presence of 17b, resulting in higher affinities (except for that of ΔHXB2). The results suggest that, when 17b is prebound to full-length gp120, the V1/V2 loops may be relocated to a position that partially blocks the CD4-binding site, leading to weakening of the CD4 interaction. Given the fact that the 17b binding epitope partially overlaps with the binding site of CCR5, the kinetic results suggest that coreceptor CCR5 binding could have a similar "release" effect on the gp120−CD4 interaction by increasing the off-rate of the latter. The results also suggest that the neutralizing effect of 17b may arise not only from partially blocking the CCR5 binding site but also from reducing the CD4 binding affinity of gp120. This negative cooperative effect of 17b may provide insight into approaches to designing antagonists for viral entry.
科研通智能强力驱动
Strongly Powered by AbleSci AI