Experimental Spectroscopic, Structural (Monomer and Dimer), Molecular Docking, Molecular Dynamics Simulation and Hirshfeld Surface Analysis of 2-Amino-6-Methylpyridine

化学 分子动力学 自然键轨道 分子间力 超极化率 离域电子 密度泛函理论 计算化学 穆利肯种群分析 分子几何学 物理化学 基准集 溶剂化 分子 结晶学 有机化学 极化率
作者
Aysha Fatima,Meenakshi Singh,Khamael M. Abualnaja,Khaled Althubeiti,S. Muthu,Nazia Siddiqui,Saleem Javed
出处
期刊:Polycyclic Aromatic Compounds [Informa]
卷期号:43 (5): 3910-3940 被引量:6
标识
DOI:10.1080/10406638.2022.2080726
摘要

2-Amino-6-methylpyridine (2-AMP) was investigated experimentally using FT-IR, 1H, NMR, and UV-Vis spectra, as well as theoretically using DFT calculations. The quantum computational calculations (the optimized structure, FT-IR, NMR and UV-Vis.) to support experimental data were performed by DFT approach at B3LYP functional and 6–311 + +G(d,p) basis set. The optimized molecular geometry and wavenumber calculations were done in the gas phase, while theoretical NMR was performed in Chloroform (CHCL3) solvation. The “Potential Energy Distribution analysis” (PED) of the title compound was performed with VEDA analysis and these assignments were compared with the experimental FT-IR spectrum. Hirshfeld analysis was also performed and analyzed intermolecular interactions on the surface of crystal, However, the most significant contributions to the Hirshfeld surface come from N···H (17.3%), C···H/H···C (23%) and H···H (68.8%). Chemical reactivity studies, Molecular Electrostatic Potential (MEP) maps, and surface area maps were also conducted. To show electron delocalization in the molecule, researchers used the electron localization function (ELF). Other topics included topological and mulliken charge distribution studies. Natural Bond Order Analysis (NBO) was performed to interpret intermolecular charge transfer.The effect of temperature on thermodynamical parameters such as Gibbs free energy, enthalpy, and entropy was examined. TD-DFT analysis was also used to shed more light on how the electronic transitions in the UV–Vis spectra were estimated. For different solvents, the estimated maximum wavelength (λ) absorbance and the band-gap energy of 2-AMP were calculated and compared to experimental results. The molecule's bioactivity is described theoretically using the Electrophilicity index and the interaction between the ligand-protein is depicted using Molecular docking. The proteins 3DQS, 4UX6, 5ADF, 5TUD, and 6E9L were studied via molecular docking. The nature of the molecule was determined by its drug-likeness. A molecular dynamics simulation was used to explore biomolecular stability.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
凊嗏淡墨完成签到,获得积分10
刚刚
2秒前
九千岁完成签到 ,获得积分10
3秒前
酷波er应助亻圭采纳,获得10
4秒前
共享精神应助123采纳,获得10
4秒前
5秒前
外向的斓发布了新的文献求助10
6秒前
科研小白完成签到,获得积分10
7秒前
zhu完成签到,获得积分10
10秒前
11秒前
liyali完成签到,获得积分10
12秒前
舒心的泥猴桃完成签到,获得积分10
12秒前
科研小白完成签到 ,获得积分10
14秒前
XY完成签到,获得积分10
15秒前
杨娟娟完成签到,获得积分10
17秒前
田様应助Ck采纳,获得10
17秒前
东东完成签到,获得积分20
18秒前
我是萨比完成签到,获得积分10
19秒前
外向的斓完成签到,获得积分20
21秒前
Ava应助wuhao采纳,获得10
21秒前
24秒前
韦行天发布了新的文献求助10
29秒前
科研通AI2S应助不达鸟采纳,获得10
29秒前
zqlxueli完成签到 ,获得积分10
29秒前
痴情的念蕾完成签到,获得积分20
32秒前
33秒前
英姑应助科研小白采纳,获得10
35秒前
35秒前
35秒前
35秒前
36秒前
爆米花应助wuhao采纳,获得10
36秒前
jiangqqi发布了新的文献求助10
37秒前
羲合发布了新的文献求助30
38秒前
38秒前
结实的老虎完成签到,获得积分10
39秒前
Chemistry发布了新的文献求助10
40秒前
40秒前
叫我杰克发布了新的文献求助10
40秒前
123发布了新的文献求助10
42秒前
高分求助中
Production Logging: Theoretical and Interpretive Elements 2500
Востребованный временем 2500
Agaricales of New Zealand 1: Pluteaceae - Entolomataceae 1040
지식생태학: 생태학, 죽은 지식을 깨우다 600
海南省蛇咬伤流行病学特征与预后影响因素分析 500
Neuromuscular and Electrodiagnostic Medicine Board Review 500
ランス多機能化技術による溶鋼脱ガス処理の高効率化の研究 500
热门求助领域 (近24小时)
化学 医学 材料科学 生物 工程类 有机化学 生物化学 纳米技术 内科学 物理 化学工程 计算机科学 复合材料 基因 遗传学 物理化学 催化作用 细胞生物学 免疫学 电极
热门帖子
关注 科研通微信公众号,转发送积分 3461184
求助须知:如何正确求助?哪些是违规求助? 3054912
关于积分的说明 9045435
捐赠科研通 2744812
什么是DOI,文献DOI怎么找? 1505685
科研通“疑难数据库(出版商)”最低求助积分说明 695786
邀请新用户注册赠送积分活动 695205