An 8-ferroptosis-related genes signature from Bronchoalveolar Lavage Fluid for prognosis in patients with idiopathic pulmonary fibrosis

医学 支气管肺泡灌洗 特发性肺纤维化 肺纤维化 基因签名 纤维化 签名(拓扑) 病理 基因 免疫学 内科学 基因表达 遗传学 生物 几何学 数学
作者
Yaowu He,Yu Shang,Yupeng Li,Menghan Wang,Dihua Yu,Yi Yang,Shangwei Ning,Hong Chen
出处
期刊:BMC Pulmonary Medicine [BioMed Central]
卷期号:22 (1) 被引量:14
标识
DOI:10.1186/s12890-021-01799-7
摘要

With the rapid advances of genetic and genomic technologies, the pathophysiological mechanisms of idiopathic pulmonary fibrosis (IPF) were gradually becoming clear, however, the prognosis of IPF was still poor. This study aimed to systematically explore the ferroptosis-related genes model associated with prognosis in IPF patients.Datasets were collected from the Gene Expression Omnibus (GEO). The least absolute shrinkage and selection operator (LASSO) Cox regression analysis was applied to create a multi-gene predicted model from patients with IPF in the Freiburg cohort of the GSE70866 dataset. The Siena cohort and the Leuven cohort were used for validation.Nineteen differentially expressed genes (DEGs) between the patients with IPF and control were associated with poor prognosis based on the univariate Cox regression analysis (all P < 0.05). According to the median value of the risk score derived from an 8-ferroptosis-related genes signature, the three cohorts' patients were stratified into two risk groups. Prognosis of high-risk group (high risk score) was significantly poorer compared with low-risk group in the three cohorts. According to multivariate Cox regression analyses, the risk score was an independently predictor for poor prognosis in the three cohorts. Receiver operating characteristic (ROC) curve analysis and decision curve analysis (DCA) confirmed the signature's predictive value in the three cohorts. According to functional analysis, inflammation- and immune-related pathways and biological process could participate in the progression of IPF.These results imply that the 8-ferroptosis-related genes signature in the bronchoalveolar lavage samples might be an effective model to predict the poor prognosis of IPF.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
yang204发布了新的文献求助10
刚刚
温哒哒完成签到 ,获得积分10
刚刚
精明冥完成签到,获得积分20
刚刚
李健的小迷弟应助西封采纳,获得10
1秒前
曾经的朝雪完成签到 ,获得积分10
1秒前
wu发布了新的文献求助10
2秒前
2秒前
3秒前
神明说困了完成签到,获得积分10
4秒前
白大帅发布了新的文献求助10
4秒前
科目三应助加油小白菜采纳,获得10
5秒前
5秒前
5秒前
王博士完成签到,获得积分10
5秒前
张文文发布了新的文献求助10
6秒前
6秒前
6秒前
Nexus应助zyy621采纳,获得20
6秒前
6秒前
8秒前
8秒前
zhu发布了新的文献求助10
8秒前
9秒前
日月完成签到 ,获得积分10
9秒前
科研通AI6.2应助史萌采纳,获得10
10秒前
10秒前
Dr_zhao发布了新的文献求助40
10秒前
10秒前
11秒前
11秒前
单薄静珊发布了新的文献求助10
12秒前
12秒前
东1991完成签到,获得积分10
12秒前
13秒前
lililililili发布了新的文献求助10
13秒前
隐形曼青应助现代苑博采纳,获得10
14秒前
15秒前
霸气猕猴桃完成签到 ,获得积分10
15秒前
韦鑫龙完成签到,获得积分10
15秒前
Sano发布了新的文献求助10
15秒前
高分求助中
Prescott's Microbiology: 2026 Release ISE 10000
University Physics with Modern Physics, 16th edition 10000
Cronologia da história de Macau 5000
Merrill's Atlas of Radiographic Positioning and Procedures - 3-Volume Set, 16th Edition 2000
Organic Reactions, Volume 118 1000
Interactions of Vowel Quality and Prosody in East Slavic 1000
Erwählung und Berufung bei Paulus: Bedeutung, Entwicklung und Funktion einer Vorstellung in ihrem frühjüdischen und griechisch-römischen Kontext 850
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7138795
求助须知:如何正确求助?哪些是违规求助? 8787249
关于积分的说明 18576071
捐赠科研通 6726753
什么是DOI,文献DOI怎么找? 3154931
关于科研通互助平台的介绍 2281948
邀请新用户注册赠送积分活动 2129373