Circular RNAs in peripheral blood mononuclear cells from ankylosing spondylitis

环状RNA 小RNA 外周血单个核细胞 折叠变化 分子生物学 核糖核酸 微阵列 生物 强直性脊柱炎 非编码RNA 信使核糖核酸 实时聚合酶链反应 转录组 下调和上调 免疫学 基因表达 基因 遗传学 体外
作者
Yiping Tang,Quan‐Bo Zhang,Fei Dai,Xia Liao,Zeng-Rong Dong,Tao Yi,Yufeng Qing
出处
期刊:Chinese Medical Journal [Lippincott Williams & Wilkins]
卷期号:134 (21): 2573-2582 被引量:9
标识
DOI:10.1097/cm9.0000000000001815
摘要

Circular RNA (circRNA) is a type of closed circular noncoding RNA (ncRNA), mostly formed by back-splicing or alternative splicing of pre-messenger RNA (mRNA). The aim of this study was to explore the expression profile of circRNA in peripheral blood mononuclear cells (PBMCs) of patients with ankylosing spondylitis (AS) and discover potential molecular markers of AS.The circRNA microarray technology was used to detect the expression of circRNAs in the peripheral blood of 6 patients with AS and 6 healthy controls (HC). To screen the differentially expressed circRNAs by fold change (FC) and P value, these differentially expressed circRNAs were analyzed by bioinformatics. In 60 cases of AS and 30 cases of HC, 4 circRNAs were subjected to real-time fluorescence quantitative polymerase chain reaction (RT-qPCR), and their correlation with various clinical indicators was analyzed. Finally, the receiver operating characteristic (ROC) curve was used to analyze their potential as AS diagnostic markers.The microarray results showed that there were 1369 significantly differently expressed (P < 0.05, FC > 1.5) circRNAs between the AS and HC groups (675 upregulated and 694 downregulated). The results of bioinformatics analysis suggested that they were mainly involved in "enzyme binding," "adenosine ribonucleotide binding," "MAPK signaling pathway", etc. The RT-qPCR results showed that the expressions of hsa_circRNA_001544 (U = 486.5, P < 0.05) and hsa_circRNA_102532 (U = 645, P < 0.05) were significantly different between the AS group and the HC group. The AS group was further divided into two subgroups: active AS (ASA) and stable AS (ASS). After analysis, it was found that compared with the HC group, hsa_circRNA_001544 was significantly increased in both ASA (U = 214, P < 0.05) and ASS groups (U = 273, P < 0.05), while hsa_circRNA_008961 (U = 250, P < 0.05) and hsa_circRNA_102532 (U = 295, P < 0.05) were only significantly increased in the ASA group. Furthermore, hsa_circRNA_012732 was significantly different between the ASA and ASS groups (U = 194, P < 0.05), and there was no statistical significance among the remaining groups. Correlation analysis results showed that hsa_circRNA_012732 was negatively correlated with Bath Ankylosing Spondylitis Disease Activity Index (BASDAI), high-sensitivity C-reactive protein (hsCRP), and globulin (GLOB) and positively correlated with lymphocyte count (LY), mean corpusular volume, and albumin (ALB), and hsa_circRNA_008961 was negatively correlated with platelet (PLT) count. ROC curve analysis showed that hsa_circRNA_001544 (95% CI = 0.610-0.831, P < 0.05) and hsa_circRNA_102532 (95% CI = 0.521-0.762, P < 0.05) were statistically significant, and their area under curve (AUC) values were 0.720 and 0.642, respectively.There are differentially expressed circRNAs in PBMCs of AS patients, and they may be involved in the occurrence and development of AS. Among these differentially expressed circRNAs, hsa_circRNA_012732 has the potential to become an indicator of disease activity, and hsa_circRNA_001544 has the potential to become a molecular marker for AS diagnosis.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
SciGPT应助体贴的洋葱采纳,获得10
1秒前
英姑应助受伤的宛丝采纳,获得10
2秒前
风趣元芹发布了新的文献求助10
2秒前
研友_EZ1aNZ发布了新的文献求助10
3秒前
研友_ZG4ml8发布了新的文献求助10
3秒前
4秒前
周全敏完成签到 ,获得积分10
4秒前
满意溪流完成签到 ,获得积分10
4秒前
只只完成签到,获得积分10
4秒前
高歌一曲发布了新的文献求助100
6秒前
HYY发布了新的文献求助10
6秒前
欢呼的未来完成签到 ,获得积分10
7秒前
Yi完成签到,获得积分10
7秒前
所所应助Voiceless采纳,获得10
9秒前
9秒前
10秒前
10秒前
在水一方应助合适的以南采纳,获得10
10秒前
话家发布了新的文献求助10
11秒前
Olivia雪雪完成签到 ,获得积分10
11秒前
Noblesj完成签到,获得积分10
12秒前
chen完成签到,获得积分10
13秒前
青海姜超发布了新的文献求助10
15秒前
Annaya发布了新的文献求助10
15秒前
某人应助牛叉小丸子采纳,获得10
16秒前
某人应助牛叉小丸子采纳,获得10
16秒前
tuzhifengyin完成签到,获得积分10
18秒前
荷叶边边头完成签到,获得积分10
19秒前
HYY完成签到,获得积分20
19秒前
wushuang完成签到 ,获得积分10
19秒前
爱笑水蜜桃完成签到,获得积分20
20秒前
今后应助Collice采纳,获得10
20秒前
21秒前
bigger.b完成签到,获得积分0
21秒前
21秒前
复杂的蛋挞完成签到 ,获得积分10
22秒前
23秒前
铲铲完成签到,获得积分10
23秒前
Fortitude完成签到 ,获得积分10
24秒前
zheyin发布了新的文献求助10
25秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Developing Genetic Editing Tools for Lysobacter 2000
Моделирование процессов самоорганизации в кристаллообразующих системах 1000
History of U.S. Space Surveillance and Satellite Cataloging 1000
Adhesion Science: Principles & Practice 800
Signals, Systems, and Signal Processing 610
Fundamentals of Pharmaceutical and Biologics Regulations: A Global Perspective, Second Edition 600
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6524755
求助须知:如何正确求助?哪些是违规求助? 8318064
关于积分的说明 17800770
捐赠科研通 5626536
什么是DOI,文献DOI怎么找? 2928823
邀请新用户注册赠送积分活动 1905497
关于科研通互助平台的介绍 1765430