Circular RNAs in peripheral blood mononuclear cells from ankylosing spondylitis

环状RNA 小RNA 外周血单个核细胞 折叠变化 分子生物学 核糖核酸 微阵列 生物 强直性脊柱炎 非编码RNA 信使核糖核酸 实时聚合酶链反应 转录组 下调和上调 免疫学 基因表达 基因 遗传学 体外
作者
Yiping Tang,Quan‐Bo Zhang,Fei Dai,Xia Liao,Zeng-Rong Dong,Tao Yi,Yufeng Qing
出处
期刊:Chinese Medical Journal [Ovid Technologies (Wolters Kluwer)]
卷期号:134 (21): 2573-2582 被引量:9
标识
DOI:10.1097/cm9.0000000000001815
摘要

Circular RNA (circRNA) is a type of closed circular noncoding RNA (ncRNA), mostly formed by back-splicing or alternative splicing of pre-messenger RNA (mRNA). The aim of this study was to explore the expression profile of circRNA in peripheral blood mononuclear cells (PBMCs) of patients with ankylosing spondylitis (AS) and discover potential molecular markers of AS.The circRNA microarray technology was used to detect the expression of circRNAs in the peripheral blood of 6 patients with AS and 6 healthy controls (HC). To screen the differentially expressed circRNAs by fold change (FC) and P value, these differentially expressed circRNAs were analyzed by bioinformatics. In 60 cases of AS and 30 cases of HC, 4 circRNAs were subjected to real-time fluorescence quantitative polymerase chain reaction (RT-qPCR), and their correlation with various clinical indicators was analyzed. Finally, the receiver operating characteristic (ROC) curve was used to analyze their potential as AS diagnostic markers.The microarray results showed that there were 1369 significantly differently expressed (P < 0.05, FC > 1.5) circRNAs between the AS and HC groups (675 upregulated and 694 downregulated). The results of bioinformatics analysis suggested that they were mainly involved in "enzyme binding," "adenosine ribonucleotide binding," "MAPK signaling pathway", etc. The RT-qPCR results showed that the expressions of hsa_circRNA_001544 (U = 486.5, P < 0.05) and hsa_circRNA_102532 (U = 645, P < 0.05) were significantly different between the AS group and the HC group. The AS group was further divided into two subgroups: active AS (ASA) and stable AS (ASS). After analysis, it was found that compared with the HC group, hsa_circRNA_001544 was significantly increased in both ASA (U = 214, P < 0.05) and ASS groups (U = 273, P < 0.05), while hsa_circRNA_008961 (U = 250, P < 0.05) and hsa_circRNA_102532 (U = 295, P < 0.05) were only significantly increased in the ASA group. Furthermore, hsa_circRNA_012732 was significantly different between the ASA and ASS groups (U = 194, P < 0.05), and there was no statistical significance among the remaining groups. Correlation analysis results showed that hsa_circRNA_012732 was negatively correlated with Bath Ankylosing Spondylitis Disease Activity Index (BASDAI), high-sensitivity C-reactive protein (hsCRP), and globulin (GLOB) and positively correlated with lymphocyte count (LY), mean corpusular volume, and albumin (ALB), and hsa_circRNA_008961 was negatively correlated with platelet (PLT) count. ROC curve analysis showed that hsa_circRNA_001544 (95% CI = 0.610-0.831, P < 0.05) and hsa_circRNA_102532 (95% CI = 0.521-0.762, P < 0.05) were statistically significant, and their area under curve (AUC) values were 0.720 and 0.642, respectively.There are differentially expressed circRNAs in PBMCs of AS patients, and they may be involved in the occurrence and development of AS. Among these differentially expressed circRNAs, hsa_circRNA_012732 has the potential to become an indicator of disease activity, and hsa_circRNA_001544 has the potential to become a molecular marker for AS diagnosis.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
王佳怡完成签到,获得积分10
1秒前
1秒前
研友_Zlx3aZ完成签到,获得积分10
1秒前
Lucas应助Hi采纳,获得10
1秒前
hoenglam发布了新的文献求助10
1秒前
ll关闭了ll文献求助
2秒前
亮123应助花花呀采纳,获得20
2秒前
2秒前
正直冰露完成签到 ,获得积分10
2秒前
2秒前
2秒前
2秒前
3秒前
3秒前
Akim应助道友且慢采纳,获得20
3秒前
3秒前
3秒前
Hanoi347发布了新的文献求助10
3秒前
小珂完成签到 ,获得积分10
4秒前
ding应助呵呵呵采纳,获得30
4秒前
4秒前
王哪跑12发布了新的文献求助10
5秒前
乐乐应助朱子怡采纳,获得10
6秒前
yuzongyan完成签到,获得积分10
6秒前
Owen应助义气平卉采纳,获得10
6秒前
斯文败类应助LIHAO采纳,获得10
6秒前
SZW发布了新的文献求助10
7秒前
尤咏慈发布了新的文献求助10
7秒前
淳于寻冬完成签到,获得积分10
7秒前
zmnzmnzmn发布了新的文献求助10
7秒前
上官若男应助没烦恼采纳,获得10
8秒前
研友_VZG7GZ应助碳氢氧采纳,获得10
8秒前
一棵树完成签到,获得积分10
8秒前
坚强夜白发布了新的文献求助10
8秒前
10秒前
11秒前
12秒前
13秒前
我是老大应助科研通管家采纳,获得10
13秒前
Twonej应助科研通管家采纳,获得30
13秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Modern Epidemiology, Fourth Edition 5000
Digital Twins of Advanced Materials Processing 2000
Weaponeering, Fourth Edition – Two Volume SET 2000
Polymorphism and polytypism in crystals 1000
Signals, Systems, and Signal Processing 610
Discrete-Time Signals and Systems 610
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 纳米技术 有机化学 物理 生物化学 化学工程 计算机科学 复合材料 内科学 催化作用 光电子学 物理化学 电极 冶金 遗传学 细胞生物学
热门帖子
关注 科研通微信公众号,转发送积分 6024222
求助须知:如何正确求助?哪些是违规求助? 7655056
关于积分的说明 16175614
捐赠科研通 5172608
什么是DOI,文献DOI怎么找? 2767655
邀请新用户注册赠送积分活动 1751115
关于科研通互助平台的介绍 1637425