The transcription factor OsbZIP48 governs rice responses to zinc deficiency

Abstract Zinc deficiency is the most prevalent micronutrient disorder in rice and leads to delayed development and decreased yield. Nevertheless, despite its primary importance, how rice responds to zinc deficiency remains poorly understood. Herein, we present genetic evidence that OsbZIP48 is essential for regulating rice responses to zinc deficiency. Using the reverse genetics approach, genetic inactivation of OsbZIP48 in rice seedlings caused a hyper sensitivity to zinc deficiency, associated with a significant decrease in the root-to-shoot translocation of zinc. Consistently, OsbZIP48 was constitutively expressed in roots, slightly induced by zinc deficiency in shoots, and localized into nuclei induced by Zn deficiency. Comparative transcriptome analysis of the wild-type plants and osbzip48 mutant grown under zinc deficiency enabled the identification of OsbZIP48 target genes, including key zinc transporter genes ( OsZIP4 and OsZIP8 ). We demonstrated that OsbZIP48 controlled the expressions of these genes by directly binding to their promoters, specifically to the zinc deficiency response element (ZDRE) motif. Collectively, we showed that the OsbZIP48 gene encodes for a transcription factor in rice, and demonstrates its critical role in the response to zinc deficiency in this crop. This knowledge is crucial for the design of rice plants that are resilient to the globally prevalent zinc limitation through zinc bio-fortification programs.