生物
甾醇
计算生物学
基因组
DNA微阵列
生物信息学
遗传学
生物化学
基因
胆固醇
基因表达
作者
Jorge Barriuso,Alicia Prieto,Marı́a Jesús Martı́nez
出处
期刊:BMC Genomics
[BioMed Central]
日期:2013-10-18
卷期号:14 (1)
被引量:25
标识
DOI:10.1186/1471-2164-14-712
摘要
Abstract Background Sterol esterases and lipases are enzymes able to efficiently catalyze synthesis and hydrolysis reactions of both sterol esters and triglycerides and due to their versatility could be widely used in different industrial applications. Lipases with this ability have been reported in the yeast Candida rugosa that secretes several extracellular enzymes with a high level of sequence identity, although different substrate specificity. This versatility has also been found in the sterol esterases from the ascomycetes Ophiostoma piceae and Melanocarpus albomyces . Results In this work we present an in silico search of new sterol esterase and lipase sequences from the genomes of environmental fungi. The strategy followed included identification and search of conserved domains from these versatile enzymes, phylogenetic studies, sequence analysis and 3D modeling of the selected candidates. Conclusions Six potential putative enzymes were selected and their kinetic properties and substrate selectivity are discussed on the basis of their similarity with previously characterized sterol esterases/lipases with known structures.
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