miR-17-5p-CXCL14 axis related transcriptome profile and clinical outcome in diffuse gliomas

CXCL14型 胶质瘤 转录组 生物 间质细胞 小RNA 癌症研究 免疫系统 基因表达谱 基因 基因表达 免疫学 遗传学 趋化因子 趋化因子受体
作者
Ailiang Zeng,Jianxin Yin,Zheng Wang,Chuanbao Zhang,Rui Li,Zhuoran Zhang,Wei Yan,Yongping You
出处
期刊:OncoImmunology [Informa]
卷期号:7 (12): e1510277-e1510277 被引量:19
标识
DOI:10.1080/2162402x.2018.1510277
摘要

GBM tissues are comprised of not only tumor cells but also tumor-associated nontumor cells, such as stromal cells and immune cells, which dilute the purity of glioma cells and function in glioma biology. However, the roles of miRNAs in modulating glioma purity are not clarified. In total, 838 glioma samples with transcriptome data, including 537 RNAseq data from TCGA project and 301 microarray data from Chinese Glioma Genome Atlas (CGGA project), were recruited into our investigation. Tumor purity, molecular subtypes and IDH status were also available. R language was employed as the main tool for statistical analysis and graphical work. Screening miRNA profiling and paired TCGA samples' transcriptome data demonstrates that miR-17-5p expression harbors the most significant positive correlation with glioma purity among all miRNAs. CXCL14 shows robust negative correlation with miR-17-5p expression in TCGA and CGGA dataset. miR-17-5p directly targets CXCL14 and functions as a tumor-suppressor of GBM. CXCL14 showed lower expression in proneural subtype and may contribute as a potential marker for proneural subtype in glioma. Genes markedly correlated with CXCL14 are involved in essential functions associated with anti-tumor immune process. CXCL14 has a strong correlation with immune(T cells, Monocytic lineage and Neutrophils) and Fibroblasts within glioma environment. miR-17-5p and CXCL14 exhibited predictive values for high-grade glioma(HGG) patients: Higher miR-17-5p indicated significantly longer survival while lower CXCL14 indicated longer survival. Our results highlight the importance of the miR-17-5p-CXCL14 axis in regulating key steps of anti-tumor immune process and may serve as potential targets of immune treatments for gliomas.
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