Potential biomarkers of acute myocardial infarction based on the composition of the blood microbiome

微生物群 小桶 医学 UniFrac公司 拟杆菌 Β-变形菌 计算生物学 α多样性 内科学 16S核糖体RNA 遗传学 生物信息学 生态学 转录组 物种多样性 生物 基因 细菌 放线菌门 基因表达
作者
R Z Chen,Yiheng Ye,Yali Ding,Zhidong Wan,Xinyu Ye,Jun Liu
出处
期刊:Clinica Chimica Acta [Elsevier BV]
卷期号:556: 117843-117843 被引量:1
标识
DOI:10.1016/j.cca.2024.117843
摘要

It is difficult to distinguish between acute myocardial infarction (AMI) and unstable angina (UA) due to their similar clinical features. In recent years, studies have shown that microbiomes have great potential in distinguishing diseases. The purpose of this study is to describe the composition of serum microbiome in the AMI and UA by 16S rDNA sequencing. Based on the high-throughput detection platform and 16S rDNA amplification sequencing technology, this study detected the blood microbial composition of 55 patients with AMI and 62 patients with UA. Alpha diversity and Beta diversity analysis were used to compare the differences in microbial composition and bacterial colony structure between AMI and UA groups. We perform PCoA (Principal Co-ordinates Analysis) based on Unweighted Unifrac distance. In addition, various statistical methods were employed to examine the significance of differences in microbial composition and genus between the two groups. PICRUSt (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States) was employed to predict KEGG (Kyoto Encyclopedia of Genes and Genomes) function from 16S sequencing data. Random forest was applied to identify biomarkers and construct the diagnostic model. Subsequently, the stability of the model was verified by 10-fold cross and the diagnostic effectiveness was evaluated through ROC (Receiver Operating Characteristic). In this study, we found that alpha diversity index of serum microbiome in AMI group was significantly higher than in UA group. T-test analysis demonstrated that the UA group presented a higher abundance of Ralstonia, Faecalibaculum and Gammaproteobacteria, while Bacteroides, Sphingomonas, Faecalibaculum, Haemophilus, Serratia, Bifidobacterium and Chloroplast were more abundant in the AMI group. The LefSe (LDA Effect Size) analysis showed that the Gammaproteobacteria, Proteobacteria, Ralstonia pickettli, Ralstonia, Burkholderiaceae and Burkholderiales were enriched in UA group, and Bacteroidales, Bacteroidia, Bacteroidota, Clostridia and Firmicutes were more abundant in the AMI group. Ten bacterial diagnostic models were constructed in the random forest. The area under the curve (AUC) in the training set was 88.01%, and the AUC value in the test set was 95.04%. In this study, the composition of blood microorganisms in the groups of patients with AMI and UA has been analyzed, providing novel insights for understanding the pathogenesis of AMI; Blood microbiome may serve as novel diagnostic biomarkers of AMI.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
脑洞疼应助PercyZzz采纳,获得10
刚刚
量子星尘发布了新的文献求助50
1秒前
hoshi1018发布了新的文献求助10
1秒前
叁金发布了新的文献求助30
1秒前
2秒前
复杂毛衣发布了新的文献求助10
2秒前
2秒前
2秒前
1111发布了新的文献求助10
3秒前
张KT完成签到,获得积分10
3秒前
wyz关注了科研通微信公众号
4秒前
明天太好完成签到,获得积分10
4秒前
4秒前
ding应助ss采纳,获得30
5秒前
huang发布了新的文献求助30
5秒前
5秒前
香蕉觅云应助百里烬言采纳,获得10
5秒前
111完成签到 ,获得积分10
5秒前
Echo完成签到,获得积分10
6秒前
7秒前
哇哈哈哈发布了新的文献求助10
7秒前
cl完成签到,获得积分20
7秒前
8秒前
旺旺完成签到,获得积分10
8秒前
8秒前
8秒前
8秒前
152完成签到 ,获得积分10
9秒前
22沫完成签到,获得积分10
9秒前
9秒前
9秒前
huang完成签到,获得积分10
10秒前
10秒前
烟花应助1111采纳,获得10
10秒前
tulip发布了新的文献求助10
10秒前
10秒前
英俊的铭应助博ge采纳,获得10
11秒前
wanci应助呼吸小研狗采纳,获得10
11秒前
12秒前
AoAoo发布了新的文献求助10
13秒前
高分求助中
Picture Books with Same-sex Parented Families: Unintentional Censorship 1000
A new approach to the extrapolation of accelerated life test data 1000
ACSM’s Guidelines for Exercise Testing and Prescription, 12th edition 500
Nucleophilic substitution in azasydnone-modified dinitroanisoles 500
不知道标题是什么 500
Indomethacinのヒトにおける経皮吸収 400
Phylogenetic study of the order Polydesmida (Myriapoda: Diplopoda) 370
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 冶金 细胞生物学 免疫学
热门帖子
关注 科研通微信公众号,转发送积分 3979122
求助须知:如何正确求助?哪些是违规求助? 3522967
关于积分的说明 11215682
捐赠科研通 3260436
什么是DOI,文献DOI怎么找? 1799990
邀请新用户注册赠送积分活动 878770
科研通“疑难数据库(出版商)”最低求助积分说明 807061