小桶
AKT1型
PI3K/AKT/mTOR通路
蛋白激酶B
医学
药理学
信号转导
激酶
对接(动物)
ErbB公司
蛋白激酶A
MAPK/ERK通路
癌症研究
基因
细胞生物学
基因表达
生物
遗传学
转录组
护理部
作者
Xiaohai Yang,Qiang Guo,Yichen Li,Mengcong Ma,Yu Sun,Qing Gu,Yunfeng Xiao
出处
期刊:Current Computer - Aided Drug Design
[Bentham Science]
日期:2024-01-16
卷期号:20
标识
DOI:10.2174/0115734099281860231221084102
摘要
Background: To a certain extent, traditional Chinese medicine (TCM)-based anesthesia has replaced opiate administration in recent years. Preliminary drug screening has revealed that scopolamine may affect breast cancer (BC) metastasis by an unknown mechanism. Methods: Network pharmacology, bioinformatics, and protein-protein interaction (PPI) topological analysis were implemented to identify the core genes linking scopolamine and BC. The core genes were then subjected to gene expression profiling interactive analysis (GEPIA). The top ten pathways were detected by gene ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. The impact of immune infiltration on the core gene difference and survival analyses was then determined. Molecular docking was then performed on the core genes and the main active components. Results: Protein kinase 1 (AKT1), epidermal growth factor receptor (EGFR), heat shock protein 90 alpha class A (HSP90AA1), caspase 3 (CASP3), and estrogen receptor 1 (ESR1) were the key genes in the interaction between scopolamine and BC cells. The KEGG enrichment analysis disclosed that the top ten pathways significantly associated with the scopolamine response in BC included "protein glycosylation," "phosphoinositide 3-kinase (PI3K)-Akt signaling," "mitogen- activated protein kinase (MAPK) signaling" and others. The AKT1, EGFR, and especially the HSP90AA1 expression levels were correlated with survival in patients with BC. Immune infiltration also influenced the survival outcome. Molecular docking demonstrated that scopolamine bound and formed stable complexes with the protein products of all five aforementioned genes. Conclusion: Scopolamine has multiple targets regulating BC cell function and may increase the risk of metastasis during treatment. Therefore, it should be preoperatively administered with caution to patients with BC. result: AKT1, EGFR, HSP90AA1, CASP3, and ESR1 were revealed as the five key genes. Find the top ten pathways with possible effects by GO enrichment analysis and KEGG pathway analysis, and get the results of core gene difference analysis and survival analyses and explore the effect of immune infiltration only on them. Finally, molecular docking between the core genes and the main active components was performed for verification.
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