Comprehensive analysis to identify DLEU2L/TAOK1 axis as a prognostic biomarker in hepatocellular carcinoma

竞争性内源性RNA 肝细胞癌 张力素 小RNA 医学 肿瘤科 PTEN公司 癌症研究 生物信息学 计算生物学 基因 核糖核酸 长非编码RNA 生物 信号转导 遗传学 PI3K/AKT/mTOR通路
作者
Yi Shi,Dandan Zhang,Ji‐Bin Liu,Xiaoli Yang,Rui Xin,Chengyou Jia,Huimin Wang,Gai‐Xia Lu,Pei‐Yao Wang,Yu Liu,Zi-Jin Li,Jing Deng,Qinlu Lin,Liang Ma,Shanshan Feng,Xiaoqi Chen,Xiaodong Zheng,You Zhou,Yongjun Hu,Huaqun Yin,Li Tian,Li‐Peng Gu,Zhongwei Lv,Fei Yu,Wen Li,Yu‐Shui Ma,Da Fu
出处
期刊:Molecular therapy. Nucleic acids [Elsevier]
卷期号:23: 702-718 被引量:29
标识
DOI:10.1016/j.omtn.2020.12.016
摘要

Hepatocellular carcinoma (HCC) is one of the deadliest malignant tumors that are harmful to human health. Increasing evidence has underscored the critical role of the competitive endogenous RNA (ceRNA) regulatory networks among various human cancers. However, the complexity and behavior characteristics of the ceRNA network in HCC were still unclear. In this study, we aimed to clarify a phosphatase and tensin homolog (PTEN)-related ceRNA regulatory network and identify potential prognostic markers associated with HCC. The expression profiles of three RNAs (long non-coding RNAs [lncRNAs], microRNAs [miRNAs], and mRNAs) were extracted from The Cancer Genome Atlas (TCGA) database. The DLEU2L-hsa-miR-100-5p/ hsa-miR-99a-5p-TAOK1 ceRNA network related to the prognosis of HCC was obtained by performing bioinformatics analysis. Importantly, we identified the DLEU2L/TAOK1 axis in the ceRNA by using correlation analysis, and it appeared to become a clinical prognostic model by Cox regression analysis. Furthermore, methylation analyses suggested that the abnormal upregulation of the DLEU2L/TAOK1 axis likely resulted from hypomethylation, and immune infiltration analysis showed that the DLEU2L/TAOK1 axis may have an impact on the changes in the tumor immune microenvironment and the development of HCC. In summary, the current study constructing a ceRNA-based DLEU2L/TAOK1 axis might be a novel important prognostic factor associated with the diagnosis and prognosis of HCC. Hepatocellular carcinoma (HCC) is one of the deadliest malignant tumors that are harmful to human health. Increasing evidence has underscored the critical role of the competitive endogenous RNA (ceRNA) regulatory networks among various human cancers. However, the complexity and behavior characteristics of the ceRNA network in HCC were still unclear. In this study, we aimed to clarify a phosphatase and tensin homolog (PTEN)-related ceRNA regulatory network and identify potential prognostic markers associated with HCC. The expression profiles of three RNAs (long non-coding RNAs [lncRNAs], microRNAs [miRNAs], and mRNAs) were extracted from The Cancer Genome Atlas (TCGA) database. The DLEU2L-hsa-miR-100-5p/ hsa-miR-99a-5p-TAOK1 ceRNA network related to the prognosis of HCC was obtained by performing bioinformatics analysis. Importantly, we identified the DLEU2L/TAOK1 axis in the ceRNA by using correlation analysis, and it appeared to become a clinical prognostic model by Cox regression analysis. Furthermore, methylation analyses suggested that the abnormal upregulation of the DLEU2L/TAOK1 axis likely resulted from hypomethylation, and immune infiltration analysis showed that the DLEU2L/TAOK1 axis may have an impact on the changes in the tumor immune microenvironment and the development of HCC. In summary, the current study constructing a ceRNA-based DLEU2L/TAOK1 axis might be a novel important prognostic factor associated with the diagnosis and prognosis of HCC.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
Tung完成签到,获得积分10
刚刚
liz发布了新的文献求助10
1秒前
鹿雅彤完成签到 ,获得积分10
2秒前
云瑾应助book采纳,获得10
2秒前
3秒前
高晨旭发布了新的文献求助10
3秒前
3秒前
炙热的雨完成签到 ,获得积分10
3秒前
时尚语梦完成签到 ,获得积分10
3秒前
lxy2002发布了新的文献求助10
4秒前
丘比特应助微笑超采纳,获得10
4秒前
完美行云完成签到,获得积分10
5秒前
纵是百万大军又如何完成签到,获得积分10
6秒前
8秒前
机灵的鸣凤完成签到,获得积分10
8秒前
Erin发布了新的文献求助30
9秒前
辛德瑞拉02完成签到,获得积分10
9秒前
舒适仰关注了科研通微信公众号
9秒前
万能图书馆应助宏、采纳,获得10
10秒前
zhangruixue0519完成签到 ,获得积分10
10秒前
完美世界应助专一的书雪采纳,获得10
11秒前
我是老大应助哈哈采纳,获得10
14秒前
lxy2002完成签到,获得积分10
15秒前
16秒前
大个应助Aurora采纳,获得10
17秒前
xbchen完成签到,获得积分10
17秒前
香蕉觅云应助谢峥嵘采纳,获得10
17秒前
18秒前
19秒前
真实的半仙完成签到,获得积分10
20秒前
FashionBoy应助yanxun采纳,获得10
20秒前
kiddnie发布了新的文献求助50
20秒前
邹友亮完成签到,获得积分10
21秒前
21秒前
Wxx完成签到 ,获得积分10
21秒前
22秒前
23秒前
23秒前
23秒前
25秒前
高分求助中
Evolution 10000
Sustainability in Tides Chemistry 2800
The Young builders of New china : the visit of the delegation of the WFDY to the Chinese People's Republic 1000
юрские динозавры восточного забайкалья 800
Diagnostic immunohistochemistry : theranostic and genomic applications 6th Edition 500
Chen Hansheng: China’s Last Romantic Revolutionary 500
China's Relations With Japan 1945-83: The Role of Liao Chengzhi 400
热门求助领域 (近24小时)
化学 医学 生物 材料科学 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 基因 遗传学 催化作用 物理化学 免疫学 量子力学 细胞生物学
热门帖子
关注 科研通微信公众号,转发送积分 3149155
求助须知:如何正确求助?哪些是违规求助? 2800230
关于积分的说明 7839164
捐赠科研通 2457781
什么是DOI,文献DOI怎么找? 1308112
科研通“疑难数据库(出版商)”最低求助积分说明 628408
版权声明 601706