•Defense compound transporter mutants show crosstalk between synthesis and storage. •Micrografting is a powerful approach to study transport processes and source–sink relations. •Transporter library screening is a powerful approach to identify novel transporters. •Transporters are required for non-uniform distribution of defense compounds. •Phloem-loading transporters of defense compounds are also key for storage in roots. •Structurally similar defense compounds have distinct source–sink relations. Plants synthesize a plethora of defense compounds crucial for their survival in a challenging and changing environment. Transport processes are important for shaping the distribution pattern of defense compounds, albeit focus hitherto has been mostly on their biosynthetic pathways. A recent identification of two glucosinolate transporters represents a breakthrough in our understanding of glucosinolate transport in Arabidopsis and has advanced knowledge in transport of defense compounds. In this review, we discuss the role of the glucosinolate transporters in establishing dynamic glucosinolate distribution patterns and source–sink relations. We focus on lessons learned from glucosinolate transport that may apply to transport of other defense compounds and discuss future avenues in the emerging field of defense compound transport. Video Abstract https://www.cell.com/cms/asset/2e2360de-f117-4d10-8ee6-80aba01637f3/mmc1.mp4 Loading ... (mp4, 36.77 MB) Download video Plants synthesize a plethora of defense compounds crucial for their survival in a challenging and changing environment. Transport processes are important for shaping the distribution pattern of defense compounds, albeit focus hitherto has been mostly on their biosynthetic pathways. A recent identification of two glucosinolate transporters represents a breakthrough in our understanding of glucosinolate transport in Arabidopsis and has advanced knowledge in transport of defense compounds. In this review, we discuss the role of the glucosinolate transporters in establishing dynamic glucosinolate distribution patterns and source–sink relations. We focus on lessons learned from glucosinolate transport that may apply to transport of other defense compounds and discuss future avenues in the emerging field of defense compound transport.