New phage typing scheme for Vibrio cholerae O1 biotype El Tor strains

打字 霍乱弧菌 噬菌体分型 埃尔托 溶解循环 微生物学 生物 噬菌体 分类方案 溶解 限制性酶 抗血清 霍乱 病毒学 大肠杆菌 细菌 DNA 分子生物学 抗原 遗传学 病毒 基因 情报检索 计算机科学
作者
D. Chattopadhyay,B L Sarkar,M. Q. Ansari,Bimal K. Chakrabarti,Madhusudan Roy,Asok Ghosh,Subhadip Pal
出处
期刊:Journal of Clinical Microbiology [American Society for Microbiology]
卷期号:31 (6): 1579-1585 被引量:80
标识
DOI:10.1128/jcm.31.6.1579-1585.1993
摘要

The conventional phage typing scheme proposed by S. Basu and S. Mukerjee (Experientia 24:299-300, 1968) has been used routinely for identification of the strains at the Vibrio Phage Reference Laboratory since 1968. However, because of limitations of this scheme, a new phage typing scheme using five newly isolated phages was incorporated into the conventional scheme. A different definition of routine test dilution (almost confluent lysis) was found to be more useful than the one previously used (confluent lysis). The 1,000 strains tested could be clustered into 27 types with the five new phages. With the new scheme of 10 phages (5 new phages and 5 phages of Basu and Mukerjee), the 1,000 strains could be grouped into 146 types. The new phages were different from each other and also from those of Basu and Mukerjee, as revealed by lytic pattern, electron microscopy, restriction endonuclease digestion, sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and antiphage antiserum studies. With the new typing scheme, 99.6% of the strains were typeable. Phage type 115 was the most common and includes 119 (11.9%) of the 1,000 strains tested. Next most common were phage types 142 (9.4%), 143 (7.0%), 104 and 116 (both 5.4%), 3 (5.3%), 5 (4.1%), 4 (3.9%), 24 (2.1%), and 100 (1.7%). The larger number of types would be useful for further classification of the strains for epidemiological purposes. This newly developed scheme is highly applicable to, and could be widely adopted for, phage typing of Vibrio cholerae O1 biotype El Tor strains.
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